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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV17093881 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596236/2022 ON817731 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29724 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29724 100.00
OEAV17093897 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596293/2022 ON817569 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29724 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29724 100.00
OEAV17093899 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596296/2022 ON817509 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29721 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29721 100.00
OEAV17093901 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596302/2022 ON817538 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29724 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29724 100.00
OEAV17093907 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596311/2022 ON817621 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29724 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29724 100.00
OEAV17093910 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596317/2022 ON817590 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29718 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29718 100.00
OEAV17093912 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596322/2022 ON817503 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29724 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29724 100.00
OEAV17093913 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-QDX37596325/2022 ON817723 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-05-31 Homo sapiens 29709 2022-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Howard,D., Batra,D., Cook,P.W., Caravas,J., Rambo-Martin,B., Sammons,S., Unoarumhi,Y., Schmerer,M., Lacek,K.A., Kendall,T., Caban Figueroa,V., Morrison,S., Gulvick,C., Sula,E., Rosenthal,S.H., Gerasimova,A., Kagan,R.M., Anderson,B., Hua,M., Liu,Y., Bernstein,L.E., Livingston,K.E., Perez,A., Shlyakhter,I.A., Rolando,R.V., Owen,R., Tanpaiboon,P., Lacbawan,F., Paden,C.R. and MacCannell,D. Respiratory Viruses Branch, Division of Viral Diseases, Centers for Disease Control and Prevention 29709 100.00
OEAV17097476 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10062/2021 ON810851 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-12-27 Homo sapiens 29701 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29701 100.00
OEAV17097483 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10069/2021 ON810858 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-12-29 Homo sapiens 29701 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29699 99.99
OEAV17097489 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10102/2022 ON810784 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-01-01 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097490 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10109/2022 ON810791 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-01-01 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097523 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10262/2022 ON811099 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-02-23 Homo sapiens 29687 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29666 99.93
OEAV17097528 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10267/2022 ON811153 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-03-04 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097529 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10268/2022 ON811154 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-03-04 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097536 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10277/2022 ON811170 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-01-11 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097581 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10545/2022 ON811178 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-01-20 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097583 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10548/2022 ON811181 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-01-10 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097588 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10555/2022 ON811187 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-02-17 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
OEAV17097649 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-LACPHL-AF10721/2022 ON811276 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2022-01-03 Homo sapiens 29684 2022-06-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Garrigues,J.M., Hemarajata,P. and Green,N.M. Los Angeles County Public Health Laboratories, Los Angeles County Public Health Lab microbial pathogen submission group 29684 100.00
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