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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV235980 SARS-CoV-2/human/CHN/Meizhou-MZ10/2020 ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes MT860463 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-02-02 Homo sapiens 868 2020-08-09 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 868 100.00
OEAV235981 SARS-CoV-2/human/CHN/Meizhou-MZ12/2020 ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes MT860464 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-02-04 Homo sapiens 835 2020-08-09 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 835 100.00
OEAV235982 SARS-CoV-2/human/CHN/Meizhou-MZ16/2020 ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes MT860465 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-03-18 Homo sapiens 781 2020-08-09 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 781 100.00
OEAV235983 SARS-CoV-2/human/CHN/Meizhou-MZ18/2020 ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes MT860469 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-03-18 Homo sapiens 779 2020-08-09 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 779 100.00
OEAV235986 SARS-CoV-2/human/CHN/Meizhou/2020 ORF7a protein (ORF7a) gene, partial cds; ORF7b (ORF7b) and ORF8 protein (ORF8) genes, complete cds; and nucleocapsid phosphoprotein (N) gene MT860462 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-02-02 Homo sapiens 1387 2020-08-09 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 1387 100.00
OEAV235987 SARS-CoV-2/human/CHN/Meizhou/2020 ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes MT860461 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-02-01 Homo sapiens 871 2020-08-09 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 871 100.00
OEAV235985 SARS-CoV-2/human/CHN/Meizhou/2020 ORF1ab polyprotein, nsp4 region, (ORF1ab) and ORF1a polyprotein, nsp4 region, (ORF1ab) genes MT856692 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-01-31 Homo sapiens 900 2020-08-07 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 900 100.00
OEAV235988 SARS-CoV-2/human/CHN/Meizhou/2020 ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes MT856443 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-01-31 Homo sapiens 867 2020-08-07 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 867 100.00
OEAV235989 SARS-CoV-2/human/CHN/Meizhou/2020 ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes MT856477 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-02-16 Homo sapiens 380 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Guo,X., Wu,H., Yu,Z. and Huang,Q. Center for Precision Medicine, Meizhou People's Hospital (Huangtang Hospital) 380 100.00
OEAV235990 SARS-CoV-2/human/USA/SC-USC-COM511/2020 ORF1ab polyprotein (ORF1ab) gene, partial cds; ORF1a polyprotein (ORF1ab) gene, complete cds; surface glycoprotein (S) gene, partial cds; and ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MT856681 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Homo sapiens 29782 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Ji,H., Altomare,D., Cui,C.B., Chen,M., Clay-Glimour,A., Wyatt,M., Buckhaults,P., Albrecht,H. and Shtutman,M. College of Pharmacy, University of South Carolina 29279 98.31
OEAV235995 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_293/2020 MT856452 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-07-17 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV235996 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_297/2020 MT856453 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-07-18 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV235997 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_298/2020 MT856454 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-07-18 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV235998 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_306/2020 MT856455 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-07-18 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV235999 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_315/2020 MT856456 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-05-31 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV236000 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_318/2020 MT856457 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-05-31 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV236001 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_323/2020 MT856458 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-05-31 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV236002 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/BGD/BCSIR_NILMRC_326/2020 MT856459 RNA viruses Severe acute respiratory syndrome coronavirus 2 Bangladesh 2020-06-03 Homo sapiens 29903 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Hossain,M.S., Mohammad Mahmud,A.S., Uzzaman,M.S., Osman,E., Habib,M.A., Akter,S., Banu,T.A., Sarkar,M.M.H., Goswami,B., Jahan,I., Nafisa,T., Molla,M.M.A., Yeasmin,M., Ghosh,A.K., Shamsuzzaman,A.K.M., Al Din,S.M.S., Ray,U.C., Sajib,S.A. and Khan,M.S. Genomic Research Lab, Bangladesh Council of Scientific and Industrial Research 29903 100.00
OEAV236003 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/SC-USC-COM0001/2020 MT856679 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-03 Homo sapiens 29782 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Ji,H., Altomare,D., Cui,C.B., Chen,M., Clay-Glimour,A., Wyatt,M., Buckhaults,P., Albrecht,H. and Shtutman,M. College of Pharmacy, University of South Carolina 29778 99.99
OEAV236004 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/SC-USC-COM0003/2020 MT856680 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Homo sapiens 29782 2020-08-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Ji,H., Altomare,D., Cui,C.B., Chen,M., Clay-Glimour,A., Wyatt,M., Buckhaults,P., Albrecht,H. and Shtutman,M. College of Pharmacy, University of South Carolina 29782 100.00
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