Detail
Experiment ID:
EXP00291
Expression Profile:
- Description:Integrated miRNA-mRNA analysis revealing the potential roles of miRNAs in chordomas
- Organism:Homo sapiens
- Source:GEO
- Source ID:GSE56183
- Platform: GPL14613
- Number of samples:12
- Overall design:Differentially expressed miRNAs and mRNAs of chordomas (n = 3) and notochord tissues (n = 3) were analyzed by using microarrays with hierarchical clustering analysis. Subsequently, the target genes of the differentially expressed miRNAs were predicted and overlapped with the differentially expressed mRNAs. Then, GO and pathway analyses were performed for the intersecting genes
- Instrument:[miRNA-2] Affymetrix Multispecies miRNA-2 Array
Design and Sample:
- Cancer Type:chordoma
- Cancer SubType:N/A
- Cell Line:N/A
- Experimental Design:cancer vs normal
- Case Sample:chordoma
- Control Sample:notochord tissues
- Num of Case:3
- Num of Control:3
- Quantification Software:Limma
- Num of miRNAs:1105
Identification:
- Num of Up:61
- Num of Down:50
Time Info:
- Create Time2016-03-14
- Update Time:2021-05-27
Status:
| miRNA ID | Cancer Type | Design | logFC | AveExpr | T value | P value | adj Pvalue | Status | Plot |
|---|