Aurantivirga profunda Song et al. 2015
General information
Name
Aurantivirga profunda
Valid publication
2015
Nomenclature type
SAORIC-234;NBRC 110606
;KACC 18400
Etymology
L. fem. adj. <i>profunda</i>, deep, profound, referring to the environment where the type strain was isolated.
Ecology
GPS
47°00'N 160°00'E, at a depth of 1000 m
Source
isolated from a deep-seawater sample collected in the north-western Pacific Ocean.
Morphology
Cells are rods (approximately 0.4-0.6 × 0.9-2.0 µm). Colonies are 0.5-1.0 mm in diameter, circular, smooth and orange after 7 days of incubation on marine agar 2216 at 15°C.
Morphology standardized
cell shape | length | width |
---|---|---|
rod | 0.9-2.0 | 0.4-0.6 |
Physiology
Nutrition type
chemoheterotroph
Oxygen requirement
aerobic
GC
GC_content |
---|
34.8 |
Gram
staining |
---|
negative |
Growth temperature
range |
---|
2216.0-15.0 |
4.0-23.0 |
Growth PH
optimum |
---|
8 |
range |
---|
5.0-10.0 |
C/N source
positive results | |||||||
---|---|---|---|---|---|---|---|
gluconate | 2-ketogluconate | maltose | 5-ketogluconate | ethanol | D-glucose | L-glutamate | α-L-rhamnose |
negative results | ||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
aesculin | glucose | D-xylitol | L-ornithine | L-arabitol | melibiose | succinate | L-serine | myo-inositol | D-ribose | sucrose | cellobiose | D-glucosamine | raffinose | L-alanine | methanol | pyruvate | L-leucine | melezitose | L-arabinose | malonate | D-fructose | trehalose | proline | itaconate | α-lactose | methylamine | D-mannitol | L-arginine | propionate | L-lysine | D-galactose | D-xylose | D-glucuronate | glycerol | n-acetyl-D-glucosamine | L-histidine | D-sorbitol | D-mannose | adonitol | citrate |
Antibiotic
sensitivity | |||
---|---|---|---|
oxytetracycline | rifampicin | ampicillin | tetracycline |
resistance | ||
---|---|---|
streptomycin | vancomycin | penicillin_g |
Biochemistry
Fattyacids
Name | Account |
---|---|
iso-C17:0 3-OH | 8.0 |
iso-C15:1 G | 19.3 |
iso-C15:0 3-OH | 7.2 |
iso-C15:0 | 29.6 |
iso-C16:0 3-OH | 8.7 |
Indole pdu
-
Nitrate rdc
-
Polar lipids
PE
Quinones
MK-6
Enzymology
Enzyme | Activity |
---|---|
acetyl β-glucosaminidase | - |
acid phosphatase | +.- |
alkaline phosphatase | + |
arginine dihydrolase | - |
catalase | - |
cystine arylamidase | + |
esterase C4 | + |
esterase C8 | + |
gelatinase | - |
leucine arylamidase | - |
lipase C14 | - |
naphthol AS-BI-phosphohydrolase | + |
oxidase | + |
trypsin | - |
urease | - |
valine arylamidase | + |
α-chymotrypsin | - |
α-fucosidase | - |
α-galactosidase | - |
α-glucosidase | - |
α-mannosidase | - |
β-galactosidase | - |
β-glucuronidase | - |
Taxonomy marker
References
1
Song, J., Choi, A., Im, M., Joung, Y., Yoshizawa, S., Cho, J.-C., and Kogure, K. Aurantivirga profunda gen. nov., sp. nov., isolated from deep-seawater, a novel member of the family Flavobacteriaceae. Int. J. Syst. Evol. Microbiol. (2015) 65:4850-4856.[DOI:10.1099/ijsem.0.000662]
[PMID:26443199]