Croceibacter atlanticus Cho and Giovannoni 2003
General information
Name
Croceibacter atlanticus
Valid publication
2003
Effective publication
2003
Nomenclature type
ATCC BAA-628
;CIP 108009;HTCC 2559;IAM 15332;JCM 21780
;KCTC 12090
Etymology
L. masc. adj. <i>atlanticus</i>, of or pertaining to the Atlantic Ocean (a species isolated from the Atlantic Ocean).
Ecology
Source
isolated from a seawater sample collected from a depth of 250 m at the Bermuda Atlantic Time Series station (BATS), in the western Sargasso Sea, Atlantic Ocean.
Morphology
Cells are non-endospore-forming, non-motile rods with rounded ends (0.3-0.6 × 1.2-3.1 µm), and occur singly or sometimes in pairs. Colonies on marine agar were 1.8-3.0 mm in diameter, bright orange or saffron-colored, uniformly circular, convex, opaque, and with a smooth surface.
Morphology standardized
cell shape | length | width |
---|---|---|
rod | 1.2-3.1 | 0.3-0.6 |
motility |
---|
+ |
Physiology
Nutrition type
chemoheterotroph
Oxygen requirement
obligately aerobic
GC
GC_content |
---|
34.8 |
Gram
staining |
---|
negative |
Growth temperature
range |
---|
10.0-28.0 |
C/N source
positive results | ||
---|---|---|
starch | gelatin | casein |
Antibiotic
sensitivity | |||||||
---|---|---|---|---|---|---|---|
nalidixic_acid | erythromycin | oxytetracycline | rifampicin | chloramfenicol | vancomycin | penicillin_g | tetracycline |
resistance | |||||
---|---|---|---|---|---|
kanamycin | carbenicillin | streptomycin | puromycin | ampicillin | gentamicin |
Biochemistry
Fattyacids
Name | Account |
---|---|
iso-C17:0 3-OH | 28.0 |
iso-C15:0 2-OH and/or C16:1 ω7c | 5.11 |
iso-C17:1 ω9c | 9.36 |
iso-C15:0 | 13.3 |
iso-C15:1 | 9.16 |
Indole pdu
-
Enzymology
Enzyme | Activity |
---|---|
catalase | + |
oxidase | - |
urease | + |
Taxonomy marker
Genomics
Submitter date: 2010/06/09 00:00 Update date: 2016/11/29 00:00
Source
The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Coverage
0
Assembly status
Complete Genome
Assembly class
haploid
Strain List
References
1
Cho, J.-C., and Giovannoni, S.J. Croceibacter atlanticus gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae. Syst. Appl. Micriobiol. (2003) 26:76-83.[DOI:10.1078/072320203322337344]
[PMID:12747413]
2
Validation List No. 92. Int. J. Syst. Evol. Microbiol. (2003) 53:935-937.[DOI:10.1099/ijs.0.02853-0]
[PMID:12892108]