Wenyingzhuangia marina Liu et al. 2014
General information
Name
Wenyingzhuangia marina
Valid publication
2014
Nomenclature type
D1;JCM 18494
;CGMCC 1.12162
;DSM 100572
Etymology
L. fem. Adj. <i>marina</i>, of or belonging to the sea.
Ecology
Source
isolated from a water sample was collected from a grouper (Epinephelus malabaricas) culture tank of a recirculating mariculture system in Tianjin, China.
Morphology
Cells are short rods, or occasionally spherical bodies (0.3-0.5 × 0.5-1.0 µm), non-flagellated, non-gliding. Colonies on R2ASA are yellow, transparent, smooth, circular, convex and 1-2 mm in diameter after incubation at 25°C for 3 days.
Morphology standardized
cell shape | length | width |
---|---|---|
rod; coccus | 0.5-1.0 | 0.3-0.5 |
flagellum |
---|
- |
Physiology
Oxygen requirement
obligately aerobic
GC
GC_content |
---|
35.9 |
Gram
staining |
---|
negative |
Growth temperature
optimum |
---|
25 |
range |
---|
15.0-30.0 |
Growth PH
optimum |
---|
6.5-7.0 |
range |
---|
5.5-9.0 |
Halophily
optimum |
---|
2-3% |
range |
---|
1-8% |
C/N source
positive results | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
cellobiose | raffinose | maltose | L-arabinose | D-fructose | L-rhamnose | D-glucose | glycogen | D-galactose | D-xylose | D-mannose | inulin | lactose |
negative results | |||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
tween 60 | tween 20 | tween 80 | tween 40 | L-tyrosine | casein | gelatin | glucose | arginine | D-arabinose | melibiose | xylitol | D-adonitol | gluconate | arbutine | D-ribose | salicine | 2-ketogluconate | melezitose | arabitol | D-tagatose | trehalose | 5-ketogluconate | β-methyl-D-xylopyranoside | D-mannitol | L-sorbose | galactitol | gentiobiose | inositol | glycerol | erythritol | L-xylose | D-sorbitol | D-lyxose | turanose | amygdalin |
Antibiotic
sensitivity | |||||
---|---|---|---|---|---|
sulfamethoxazole | oxytetracycline | chloramfenicol | clindamycin | penicillin | tetracycline |
resistance | |||
---|---|---|---|
erythromycin | streptomycin | gentamicin | oxacillin |
Biochemistry
Fattyacids
Name | Account |
---|---|
iso-C13:0 | 6.1 |
iso-C15:0 3-OH | 13.5 |
iso-C15:1 G | 10.8 |
iso-C17:0 3-OH | 15.2 |
iso-C15:0 | 23.2 |
C16:1 ω7c and/or C16:1 ω6c | 14.3 |
Indole pdu
-
Nitrate rdc
-
Polar lipids
PE
Quinones
MK-6
Enzymology
Enzyme | Activity |
---|---|
acetyl β-glucosaminidase | + |
acid phosphatase | + |
alkaline phosphatase | + |
catalase | + |
cystine arylamidase | - |
esterase C4 | - |
esterase C8 | - |
leucine arylamidase | + |
lipase C14 | - |
naphthol AS-BI-phosphohydrolase | - |
oxidase | + |
trypsin | - |
urease | - |
valine arylamidase | - |
α-chymotrypsin | - |
α-fucosidase | - |
α-galactosidase | - |
α-glucosidase | + |
α-mannosidase | - |
β-galactosidase | + |
β-glucosidase | - |
Taxonomy marker
Genomics
Submitter date: 2016/12/03 00:00 Update date: 2016/12/18 00:00
Source
DOE - JOINT GENOME INSTITUTE
Coverage
400
Assembly status
Scaffold
Assembly class
haploid
Strain List
References
1
Liu, Y., Liu, L.-Z., Liu, H.-C., Zhou, Y.-G., Qi, F.-J., and Liu, Z.-P. Wenyingzhuangia marina gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from a recirculating mariculture system. Int. J. Syst. Evol. Microbiol. (2014) 64:469-474.[DOI:10.1099/ijs.0.055012-0]
[PMID:24096358]