Zunongwangia profunda corrig. Qin et al. 2007
General information
Name
Zunongwangia profunda
Valid publication
2007
Effective publication
2007
Nomenclature type
CCTCC AB 206139;DSM 18752
;SM-A87
Etymology
L. fem. adj. <i>profunda</i>, deep, profound, referring to the environment where the type strain was isolated.
Ecology
Source
isolated from the deep-sea sediment of the southern Okinawa Trough area, at 2 mbsf (meters below seafloor).
Morphology
Cells are non-motile, non-spore-forming rods (0.3-0.6 × 1.5-3.3 µm). On marine agar, colonies are circular, 1-3 mm in diameter, convex with smooth surfaces and yellow to orange in color.
Morphology standardized
cell shape | length | width |
---|---|---|
rod | 1.5-3.3 | 0.3-0.6 |
motility |
---|
+ |
Physiology
Oxygen requirement
obligately aerobic
GC
GC_content |
---|
35.8 |
Gram
staining |
---|
negative |
Growth temperature
optimum |
---|
25.0-30.0 |
range |
---|
4.0-38.0 |
Growth PH
range |
---|
5.0-8.5 |
Halophily
optimum |
---|
3% |
range |
---|
0-12% |
C/N source
positive results | ||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gelatin | tween 20 | casein | sucrose | glucose | arabinose | methylpyruvate | D-melibiose | α-cyclodextrin | carnitine | dextrin | 2,3-propanediol | α-D-glucose | pyruvate | maltose | L-arabinose | glycyl L-aspartate | D-fructose | D-galacturonate | α-D-lactose | D-raffinose | D-glucose | L-threonine | ethanolamine | D-trehalose | acetate | D-galactose | gentiobiose | glycerol | lactulose | D-sorbitol | D-mannose | D-cellobiose | turanose | citrate |
negative results | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
carboxymethylcellulose | starch | chitin | cellulose | melibiose | mannose | sorbitol | inositol | rhamnose | amygdalin | L-ornithine | xylitol | gluconate | succinate | L-serine | myo-inositol | sebacate | L-phenylalanine | L-alanyl-glycine | 4-aminobutyrate | lactate | α-ketovalerate | L-alanine | quinate | inosine | L-fucose | glycyl L-glutamate | β-methyl-D-glucoside | D-psicose | L-leucine | phenylethylamine | succinamate | putrescine | L-alaninamide | 4-hydroxybutyrate | L-pyroglutamate | 2-ketoglutarate | urocanate | malonate | D-alanine | L-rhamnose | D-arabitol | D-serine | 3-hydroxybutyrate | itaconate | cis-aconitate | n-acetyl-D-galactosamine | D-glucosaminate | myo-erythritol | D-gluconate | formate | L-proline | D-mannitol | L-aspartate | bromosuccinate | 2-hydroxybutyrate | propionate | glucuronamide | D-saccharate | L-asparagine | L-glutamate | D-glucuronate | uridine | n-acetyl-D-glucosamine | L-histidine | adonitol |
Antibiotic
sensitivity | |||
---|---|---|---|
erythromycin | cefalosporin | oxytetracycline | tetracycline |
resistance | ||||
---|---|---|---|---|
kanamycin | streptomycin | ampicillin | gentamicin | neomycin |
Biochemistry
Fattyacids
Name | Account |
---|---|
iso-C15:1 G | 9.68 |
iso-C17:1 ω9c | 9.01 |
iso-C17:0 3-OH | 14.52 |
iso-C15:0 2-OH and/or C16:1 ω7c | 14.59 |
C15:0 | 7.45 |
iso-C15:0 | 22.73 |
H2s pdu
-
Indole pdu
-
Nitrate rdc
+
Quinones
MK-6
Vp test
-
Enzymology
Enzyme | Activity |
---|---|
acetyl β-glucosaminidase | + |
acid phosphatase | + |
alkaline phosphatase | + |
arginine dihydrolase | - |
catalase | + |
cystine arylamidase | - |
esterase C4 | - |
esterase C8 | - |
gelatinase | + |
leucine arylamidase | + |
lipase C14 | - |
lysine decarboxylase | - |
naphthol AS-BI-phosphohydrolase | + |
ornithine decarboxylase | - |
oxidase | + |
trypsin | + |
tryptophan deaminase | - |
valine arylamidase | + |
α-chymotrypsin | - |
α-fucosidase | - |
α-galactosidase | - |
α-glucosidase | + |
α-mannosidase | - |
β-galactosidase | + |
β-glucosidase | + |
β-glucuronidase | - |
Taxonomy marker
Genomics
Submitter date: 2010/04/21 00:00 Update date: 2016/11/29 00:00
Source
ShanDong University
Coverage
0
Assembly status
Complete Genome
Assembly class
haploid
Strain List
References
1
Qin, Q.-L., Zhao, D.-L., Wang, J., Chen, X.-L., Dang, H.-Y., Li, T.-G., Zhang, Y.-Z., and Gao, P.-J. Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment. FEMS Microbiol. Lett. (2007) 271:53-58.[DOI:10.1111/j.1574-6968.2007.00694.x]
[PMID:17391365]
2
Validation list No. 116. Int. J. Syst. Evol. Microbiol. (2007) 57:1371-1373.[DOI:10.1099/ijs.0.65337-0]
[PMID:17625158]