Oleiagrimonas soli Fang et al. 2015
General information
Name
Oleiagrimonas soli
Valid publication
2015
Nomenclature type
3.5X;NBRC 110685
;KCTC 42351
;CPCC 100614
Etymology
L. neut. gen. n. soli of soil, the source of the organism.
Ecology
Source
isolated from soil in Shengli oilfield, Shandong Province, China.
Morphology
Cells are single rods (approximately 0.3-0.7 × 0.7-1.5 µm), and motile by a single polar flagellum. Colonies are yellow, smooth, opaque, circular and convex with sticky colloids on nutrient agar plates.
Morphology standardized
cell shape | length | width |
---|---|---|
rod | 0.7-1.5 | 0.3-0.7 |
motility |
---|
- |
flagellum | arrangement |
---|---|
+ | polar |
Physiology
GC
GC_content |
---|
67 |
Gram
staining |
---|
negative |
Growth temperature
optimum |
---|
20.0-30.0 |
range |
---|
4.0-41.0 |
Growth PH
optimum |
---|
6.0-8.0 |
range |
---|
4.0-10.0 |
Halophily
optimum |
---|
1.5-5% |
range |
---|
0.5-10% |
C/N source
positive results | |||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L-ornithine | L-phenylalanine | L-alanyl-glycine | L-alanine | α-D-glucose | glycyl L-glutamate | L-leucine | 2-ketoglutarate | acetate | alaninamide | L-asparagine | L-glutamate | methylpyruvate | L-serine | mannitol | dextrin | lactate | tween 40 | formate | L-aspartate | glycyl L-proline | propionate | glucuronamide | D-galactose | gentiobiose | turanose |
negative results | |||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gluconate | adipate | potassium gluconate | glucose | phenylacetate | D-arabinose | L-arabitol | melibiose | xylitol | D-adonitol | arbutine | sucrose | starch | potassium 2-ketogluconate | 2-ketogluconate | dulcitol | L-rhamnose | D-tagatose | D-arabitol | 5-ketogluconate | β-methyl-D-xylopyranoside | D-mannitol | L-sorbose | potassium 5-ketogluconate | inositol | glycerol | erythritol | L-xylose | D-sorbitol | lactose |
Biochemistry
Fattyacids
Name | Account |
---|---|
iso-C11:0 | 5.5 |
iso-C17:0 | 30.6 |
iso-C11:0 3-OH | 5.1 |
C16:0 | 5.2 |
iso-C15:0 | 27.6 |
iso-C17:1 ω9c and/or 10-methyl C16:0 | 11.3 |
Indole pdu
-
Nitrate rdc
+
Polar lipids
DPG;PE
Quinones
UQ-8
Enzymology
Enzyme | Activity |
---|---|
acetyl β-glucosaminidase | + |
acid phosphatase | + |
alkaline phosphatase | +.u.- |
catalase | + |
cystine arylamidase | + |
esterase C4 | +.u.- |
esterase C8 | +.u.- |
leucine arylamidase | + |
lipase C14 | + |
naphthol AS-BI-phosphohydrolase | + |
oxidase | + |
trypsin | + |
urease | + |
valine arylamidase | + |
α-chymotrypsin | + |
α-fucosidase | - |
α-galactosidase | - |
α-glucosidase | + |
α-mannosidase | - |
β-glucuronidase | - |
Taxonomy marker
Genomics
Submitter date: 2014/10/01 00:00 Update date: 2015/02/23 00:00
Source
school of environment
Coverage
345.2
Assembly status
Scaffold
Assembly class
haploid
Strain List
References
1
Fang, T., Wang, H., Huang, Y., Zhou, H., and Dong, P. Oleiagrimonas soli gen. nov., sp. nov., a genome-sequenced gammaproteobacterium isolated from an oil field. Int. J. Syst. Evol. Microbiol. (2015) 65:1666-1671.[DOI:10.1099/ijs.0.000158]
[PMID:25724748]
2
Yang, S.-H., Seo, H.-S., Seong, C.N., and Kwon, K.K. Oleiagrimonas citrea sp. nov., a marine bacterium isolated from tidal flat sediment and emended description of the genus Oleiagrimonas Fang et al. 2015 and Oleiagrimonas soli. Int. J. Syst. Evol. Microbiol. (2017) 67:1672-1675.[DOI:10.1099/ijsem.0.001846]
[PMID:28211311]