Basic information

CPKB ID CP01790
IUPAC Name
(3S,6R,9R,12S,15R,18R,24S,30S)-3,6-dibenzyl-12,27-bis[(2S)-butan-2-yl]-15-(1-hydroxypropan-2-yl)-18-(2-hydroxypropan-2-yl)-4,10,16,19,25-pentamethyl-21-(2-methylpropyl)-9,24-di(propan-2-yl)-13-oxa-1,4,7,10,16,19,22,25,28-nonazabicyclo[28.3.0]tritriacontane-2,5,8,11,14,17,20,23,26,29-decone
Source

Aureobasidium pullulans [Division : Plants and Fungi]

Taxonomy :5580 (Fungi-Ascomycota-Dothideales-Dothideomycetes-Saccotheciaceae Aureobasidium)  

Wikipedia: Aureobasidium pullulans

PubChem  

Family

Aureobasidin   Norine  

Function

Anti-Microbial   Norine  

Information

Aureobasidin D is a natural product found in Aureobasidium pullulans with data available.

PubChem|101613781   Norine|NOR00284  

Legend

Structure

similarity structure
Molecular Formula

C66H103N9O13

Molecular Weight 1229.767534 g/mol
SMILES

RUN SEA Predictions

CC[C@H](C)C1NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)N(C)C(=O)[C@@H](Cc2ccccc2)NC(=O)[C@@H](C(C)C)N(C)C(=O)[C@H]([C@@H](C)CC)OC(=O)[C@@H](C(C)CO)N(C)C(=O)[C@@H](C(C)(C)O)N(C)C(=O)C(CC(C)C)NC(=O)[C@H](C(C)C)N(C)C1=O  

PubChem|101613781

InChI
InChI=1S/C66H103N9O13/c1-19-41(9)50-62(83)71(15)51(39(5)6)57(78)67-46(34-38(3)4)60(81)74(18)55(66(12,13)87)64(85)73(17)53(43(11)37-76)65(86)88-54(42(10)20-2)63(84)72(16)52(40(7)8)58(79)68-47(35-44-28-23-21-24-29-44)59(80)70(14)49(36-45-30-25-22-26-31-45)61(82)75-33-27-32-48(75)56(77)69-50/h21-26,28-31,38-43,46-55,76,87H,19-20,27,32-37H2,1-18H3,(H,67,78)(H,68,79)(H,69,77)/t41-,42-,43?,46?,47+,48-,49-,50?,51-,52+,53+,54-,55-/m0/s1  
InChIKey
XLGICCRHFFBOEL-KDMCEPQINA-N
2D Structure
PubChem|101613781

Sequence

Graph alignment
Local alignment
IUPAC Condensed
cyclo[DL-Ile-N(Me)Val-DL-Leu-D-N(Me)Val(3-OH)-D-N(Me)Val(4-OH)-OIle-D-N(Me)Val-D-Phe-N(Me)Phe-Pro]  

PubChem|101613781

Amino acid chain
DL-Ile(1)--N(Me)Val--DL-Leu--D-N(Me)Val(3-OH)--D-N(Me)Val(4-OH)--OIle--D-N(Me)Val--D-Phe--N(Me)Phe--Pro(1)  

CyclicPepedia|PP

Graph representation
DL-Ile,N(Me)Val,DL-Leu,D-N(Me)Val(3-OH),D-N(Me)Val(4-OH),OIle,D-N(Me)Val,D-Phe,N(Me)Phe,Pro @0,9  

CyclicPepedia|PP

One letter code from Structure
VFFPIVLTV  

CyclicPepedia|Struct2seq

Amino acid chain from Structure
Ac-Val(1)--Phe--NMe-Phe--Pro--Ile--NMe-Val--Leu--bOH-NMe-Val--gOH-NMe-Val(1)  

CyclicPepedia|Struct2seq

Description of the conversion sequence The one letter code and Amino acid chain derived from the structural transformation may be inconsistent, with the Amino acid chain containing Essential Amino acid and the one letter code not.
svg Image

PubChem|101613781


Chemical and Physical Properties

CyclicPepedia|Struc2Seq + PP

Structure Properties

Property Name Property Value
Exact Mass 1229.767534
Number of Rings 4.0
Complexity 0.545454545
XlogP3 AA 3.8272
Heavy Atom Count 88.0
Hydrogen Bond Donor Count 5.0
Hydrogen Bond Acceptor Count 13.0
Rotatable Bond Count 15.0
Property Name Property Value
Formal Charge 0.0
Refractivity 334.0777
Rule_of_Five 0.0
Number of Atoms 88.0
Topological Polar Surface Area 275.92
Refractivity 334.0777
Veber Rule 0.0
Ghose Filter 0.0

Property Name Property Value
RDKit Fingerprint
01100011101010100100110011111001110100100111110000111010100101111110101111101100100110010010110011010111010001111111001001110010010001101110110101011111100110010100001110010110110111011111100111101100101111001000100101001010010111110101011111001110111101101111110111001000000010101011001100000111011010011110101111000111110100110010111011010110111000100011011001101011000011000000111001100011010101000110000110001110001010100000101101111011111111100000000100011010111110010100010000001010001110011100110000101101110101110100111110011101111111110101100010010110101101011110010011101001100010111100111100110001001010011010110100001111100100101110000111101111010011000110001010100001011101011100011101111010100111100000010100101011001001011101100110011010101110101010001110010010001001111001001010001000001010001000100000111001111011110100111011101111011010111011111101101001000100100110111001001011111101101010111101010111011110011110000001011111101010001001011001010011011100110111001010010001010100010010010001101101001111111011110110111011110000101110010000111100101111101001010001001001110110001001101001010011000000111000001111001001010100010100111001101000101110101110101111011011010110011111000111101000110101001101011111100000011101010111011111010011100101001110011000110100100010110111110001111001011111100001000101101111100011010011111110101001010111110011010000110010100101011010011100000111110101011110110011110101100011101010011011111110001011111011011100000110010011101001110000111111011100000000110110111111000011100000001000010100011110100100010110100001101100110111001101101101100010001001000011100111110001101110111010100110010100010010010111001101100011000110001010010001010001010001011110100100100111000011010111111000100100100011111110010101010011010110101010001100100001011111100010001011111101101100101011110010111110110111110011000110100000000101110111100001010100011101111100101111101101001011010010110101010010110111111111010011111011111111011001010001001111110110100101001000100110010010000111101111100100101111111001011011
Morgan Fingerprint
0100110000100000000100000000000001000000011000000000000000000000100000000000000010001000001000100000100000000100001100000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001001000000001000000000000000000000100000000000000000000000000000100001000001000000100000000000010000000000000000000010001100000000000000010010000000000100000000000000000010010000100000000000000000000000000000000001000000000000010000000001010000000000000000000000010001000001000000000000001000000000000100000000000100000000000000000001000000000000000000000000100100000000100000010000000000000000000000000000000010000100000000000000010000010000000010001000001000000001000000000100000000000100000000000000000001000100000000000000000001000000001000000000000000000001000100000000000000000000001000100101000000100000000000000000000000001001000000000000000000000000010000010000000000000000000000000000000000000000010000000010000010000000000000001000000000000000000000000000100000000000001000000000000000000010000
MACCS Keys
00000000000000000000000000000000000000000000000000000000010000000010000010110001001101000111110111001000110011111011111011110101110100001111111101111111111111111111110

Sequence Properties

Property Name Property Value
Boman Index -2.81666666666666
Instability 20.8555555555555
Charge -0.00201570060725275
Aliphatic Index 183.333333333333

Manufacturers

Manufacturers Name Value
CreativePeptides
Bayer healthcare pharmaceuticals
Upsher smith laboratories
Merck
Manufacturers Name Value
Apotex
Baxter Healthcare Corp
Pharmasources
Novartis
AstraZeneca

Reference

Pubmed_ID Title DOI Journal

22029824

Extremely abundant antimicrobial peptides existed in the skins of nine kinds of Chinese odorous frogs 10.1021/pr200782u.

J Proteome Res

Extremely abundant antimicrobial peptides existed in the skins of nine kinds of Chinese odorous frogs

Abstract

  • Peptide agents are regarded as hopeful candidates to solve life-threatening resistance of pathogenic microorganisms to classic antibiotics due to their unique action mechanisms. Peptidomic and genomic investigation of natural antimicrobial peptides (AMPs) from amphibian skin secretions can provide a large amount of structure-functional information to design peptide antibiotics with therapeutic potential. In the present study, we identified a large number of AMPs from the skins of nine kinds of Chinese odorous frogs. Eighty AMPs were purified from three different odorous frogs and confirmed by peptidomic analysis. Our results indicated that post-translational modification of AMPs rarely happened in odorous frogs. cDNAs encoding precursors of 728 AMPs, including all the precursors of the confirmed 80 native peptides, were cloned from the constructed AMP cDNA libraries of nine Chinese odorous frogs. On the basis of the sequence similarity of deduced mature peptides, these 728 AMPs were grouped into 97 different families in which 71 novel families were identified. Out of these 728 AMPs, 662 AMPs were novel and 28 AMPs were reported previously in other frog species. Our results revealed that identical AMPs were widely distributed in odorous frogs; 49 presently identified AMPs could find their identical molecules in different amphibian species. Purified peptides showed strong antimicrobial activities against 4 tested microbe strains. Twenty-three deduced peptides were synthesized and their bioactivities, including antimicrobial, antioxidant, hemolytic, immunomodulatory and insulin-releasing activities, were evaluated. Our findings demonstrate the extreme diversity of AMPs in amphibian skins and provide plenty of templates to develop novel peptide antibiotics.