2. PATHOGENS
Basic Information
Accession number
GCA_000328405.1
Release date
2012-12-21
Organism
Vibrio parahaemolyticus BB22OP
Species name
Vibrio parahaemolyticus
Assembly level
Complete Genome
Assembly name
ASM32840v1
Assembly submitter
Virginia Tech
Assembly Type
haploid
Genome size
5.1 Mb
GC percent
45.5
Contig count
2
Collection date
-
Sample location
-
Host
-
Isolation source
-
Isolate type
-
Strain
BB22OP
Isolate
-
ARG List
ORF_ID Pass_Bitscore Best_Hit_Bitscore Best_Hit_ARO Best_Identities ARO Model_type SNPs_in_Best_Hit_ARO Other_SNPs Drug class Resistance mechanism AMR gene family Description
CP003972.1_1057 # 1171774 # 1173375 710.0 720.309 tet(35) 95.39 ARO:3000481 protein homolog model tetracycline antibiotic antibiotic efflux ATP-binding cassette (ABC) antibiotic efflux pump Tet35 is a tetracycline efflux pump found in the Gram-negative Vibrio and Stenotrophomonas. It is unrelated to other tet resistance genes.
CP003972.1_1059 # 1176029 # 1176982 400.0 535.413 TxR 86.29 ARO:3005008 protein homolog model tetracycline antibiotic antibiotic efflux ATP-binding cassette (ABC) antibiotic efflux pump TxR is a putative transcription regulator that plays a role in conferring tetracycline resistance. It is required for proper functioning of Tet35.
CP003972.1_2368 # 2654144 # 2654341 100.0 102.064 rsmA 90.91 ARO:3005069 protein homolog model fluoroquinolone antibiotic; diaminopyrimidine antibiotic; phenicol antibiotic antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump rsmA is a gene that regulates virulence of Pseudomonas aeruginosa. However, its negative effect on MexEF-OprN overexpression has been noted to confer resistance to various antibiotics. It's Escherichia coli homolog is csrA.
CP003972.1_2592 # 2898524 # 2899609 175.0 184.111 vanT gene in vanG cluster 33.24 ARO:3002972 protein homolog model glycopeptide antibiotic antibiotic target alteration glycopeptide resistance gene cluster; vanT Also known as vanTG, is a vanT variant found in the vanG gene cluster.
CP003972.1_2648 # 2955698 # 2956330 400.0 418.313 CRP 95.24 ARO:3000518 protein homolog model macrolide antibiotic; fluoroquinolone antibiotic; penam antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump CRP is a global regulator that represses MdtEF multidrug efflux pump expression.
CP003973.1_430 # 456717 # 459857 750.0 827.78 adeF 43.92 ARO:3000777 protein homolog model fluoroquinolone antibiotic; tetracycline antibiotic antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH.
CP003973.1_436 # 464688 # 465539 500.0 585.489 CARB-20 100.0 ARO:3003150 protein homolog model penam antibiotic inactivation CARB beta-lactamase CARB-20 is a beta-lactamase found worldwide in Vibrio parahaemolyticus.
CP003973.1_1097 # 1229126 # 1232278 750.0 796.193 adeF 42.09 ARO:3000777 protein homolog model fluoroquinolone antibiotic; tetracycline antibiotic antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH.
CP003972.1_409 # 429304 # 431184 1000.0 1060.83 Escherichia coli parE conferring resistance to fluoroquinolones 78.98 ARO:3003316 protein variant model D476N fluoroquinolone antibiotic antibiotic target alteration fluoroquinolone resistant parE Point mutation in Escherichia coli parE resulting in fluoroquinolones resistance.
CP003972.1_429 # 450187 # 451980 500.0 524.628 Haemophilus influenzae PBP3 conferring resistance to beta-lactam antibiotics 46.7 ARO:3004446 protein variant model S385T cephalosporin; cephamycin; penam antibiotic target alteration Penicillin-binding protein mutations conferring resistance to beta-lactam antibiotics PBP3 is a penicillin-binding protein and beta-lactam resistance enzyme encoded by the ftsI gene in Haemophilus influenzae. Mutations in ftsI confer resistance to beta-lactam antibiotics.
VF List
Query_id %Identity E-value Related genes VF ID Virulence factor VFcategory VFcategoryID Characteristics Description Strain
CP003972.1_123 82.318 0.0 epsD VF0613 Eps T2SS Effector delivery system VFC0086 (epsD) type II secretion system secretin GspD [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
CP003972.1_124 84.114 0.0 epsE VF0613 Eps T2SS Effector delivery system VFC0086 (epsE) type II secretion system ATPase GspE [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
CP003972.1_125 79.506 0.0 epsF VF0613 Eps T2SS Effector delivery system VFC0086 (epsF) type II secretion system inner membrane protein GspF [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
CP003972.1_126 90.278 2.03E-95 epsG VF0613 Eps T2SS Effector delivery system VFC0086 (epsG) type II secretion system major pseudopilin GspG [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
CP003972.1_128 80.357 5.12E-62 epsI VF0613 Eps T2SS Effector delivery system VFC0086 (epsI) type II secretion system minor pseudopilin GspI [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
CP003972.1_129 62.78 4.55E-101 epsJ VF0613 Eps T2SS Effector delivery system VFC0086 (epsJ) type II secretion system minor pseudopilin GspJ [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
CP003972.1_130 66.071 1.22E-156 epsK VF0613 Eps T2SS Effector delivery system VFC0086 (epsK) type II secretion system minor pseudopilin GspK [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
CP003972.1_198 63.095 6.25E-115 lgtF VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (lgtF) beta-1,4-glucosyltransferase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_202 64.865 1.53E-168 rffG VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (rffG) dTDP-glucose 46-dehydratase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_203 65.411 3.42E-142 wbtL VF0542 LPS Immune modulation VFC0258 The structure of Francisella spp. lipid A is unique in that it is modified by various carbohydrates that greatly reduce TLR4 activation and allow for immune evasion (wbtL) glucose-1-phosphate thymidylyltransferase [LPS (VF0542) - Immune modulation (VFC0258)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
CP003972.1_220 74.038 2.35E-171 rfaD VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (rfaD) ADP-L-glycero-D-mannoheptose-6-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_236 81.72 0.0 gmd VF0392 O-antigen Immune modulation VFC0258 Clinical Y. enterocolitica isolates from humans predominantly belong to serotypes O:3, O:9, O:8 and O:5,27; Y. enterocolitica O antigen expression is temperature regulated. (gmd) GDP-mannose 4,6-dehydratase [O-antigen (VF0392) - Immune modulation (VFC0258)] [Yersinia enterocolitica subsp. enterocolitica 8081] Yersinia enterocolitica
CP003972.1_237 73.899 0.0 YE_RS15425 VF0392 O-antigen Immune modulation VFC0258 Clinical Y. enterocolitica isolates from humans predominantly belong to serotypes O:3, O:9, O:8 and O:5,27; Y. enterocolitica O antigen expression is temperature regulated. (YE_RS15425) GDP-L-fucose synthase [O-antigen (VF0392) - Immune modulation (VFC0258)] [Yersinia enterocolitica subsp. enterocolitica 8081] Yersinia enterocolitica
CP003972.1_239 63.983 0.0 YE_RS15420 VF0392 O-antigen Immune modulation VFC0258 Clinical Y. enterocolitica isolates from humans predominantly belong to serotypes O:3, O:9, O:8 and O:5,27; Y. enterocolitica O antigen expression is temperature regulated. (YE_RS15420) mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase [O-antigen (VF0392) - Immune modulation (VFC0258)] [Yersinia enterocolitica subsp. enterocolitica 8081] Yersinia enterocolitica
CP003972.1_246 77.062 0.0 ugd VF0560 Capsule Immune modulation VFC0258 The Klebsiella polysaccharide capsule is produced through a Wzy-dependent process, for which the synthesis and export machinery are encoded in a single 10-30 kb region of the genome known as the K locus.; 78 distinct capsule phenotypes have been recognized by serological typing, but many isolates are serologically non-typable.; capsular serotypes vary substantially in the degree of serum resistance; K1, K2 and K5 are highly serum resistant and are associated with hypervirulent strains that differ from classical K. pneumoniae in that they commonly cause community-acquired disease. (ugd) UDP-glucose 6-dehydrogenase [Capsule (VF0560) - Immune modulation (VFC0258)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Klebsiella pneumoniae
CP003972.1_403 65.021 0.0 rfaE VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (rfaE) ADP-heptose synthase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_440 74.342 7.84E-174 lpxC VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (lpxC) UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_552 60.89 0.0 icl VF0253 Isocitrate lyase Others VFC0346 (icl) Isocitrate lyase Icl (isocitrase) (isocitratase) [Isocitrate lyase (VF0253) - Others (VFC0346)] [Mycobacterium tuberculosis H37Rv] Mycobacterium tuberculosis
CP003972.1_652 90.119 5.17E-158 motA VF0519 Flagella Motility VFC0204 Single polar flagellum (motA) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_653 82.484 0.0 motB VF0519 Flagella Motility VFC0204 Single polar flagellum (motB) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_667 84.758 1.76E-161 IlpA VF0513 IlpA Adherence VFC0001 (IlpA) immunogenic lipoprotein A [IlpA (VF0513) - Adherence (VFC0001)] [Vibrio vulnificus YJ016] Vibrio vulnificus
CP003972.1_708 79.715 7.41E-173 kdsA VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (kdsA) 2-dehydro-3-deoxyphosphooctonate aldolase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_726 73.867 0.0 flgT VF0519 Flagella Motility VFC0204 Single polar flagellum (flgT) Vibrio-specific flagellar H-ring component FlgT [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_727 85.849 2.38E-141 flgO VF0519 Flagella Motility VFC0204 Single polar flagellum (flgO) Vibrio-specific flagellar H-ring component FlgO [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_728 83.077 4.91E-75 flgP VF0519 Flagella Motility VFC0204 Single polar flagellum (flgP) Vibrio-specific flagellar H-ring component FlgP [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_729 69.504 2.08E-71 flgN VF0519 Flagella Motility VFC0204 Single polar flagellum (flgN) flagellar biosynthesis chaperone FlgN [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_730 63.208 2.88E-42 flgM VF0519 Flagella Motility VFC0204 Single polar flagellum (flgM) negative regulator of flagellin synthesis FlgM, putative [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_732 86.688 0.0 cheV VF0519 Flagella Motility VFC0204 Single polar flagellum (cheV) chemotaxis protein CheV [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_733 93.091 0.0 cheR VF0519 Flagella Motility VFC0204 Single polar flagellum (cheR) chemotaxis protein methyltransferase CheR [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_734 82.443 9.8E-83 flgB VF0519 Flagella Motility VFC0204 Single polar flagellum (flgB) flagellar basal body rod protein FlgB [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_735 89.13 1.75E-86 flgC VF0519 Flagella Motility VFC0204 Single polar flagellum (flgC) flagellar basal body rod protein FlgC [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_736 84.681 7.57E-146 flgD VF0519 Flagella Motility VFC0204 Single polar flagellum (flgD) flagellar basal-body rod modification protein FlgD [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_737 81.693 0.0 flgE VF0519 Flagella Motility VFC0204 Single polar flagellum (flgE) flagellar hook protein FlgE [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_738 81.526 2.45E-154 flgF VF0519 Flagella Motility VFC0204 Single polar flagellum (flgF) flagellar basal-body rod protein FlgF [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_739 85.878 5.42E-173 flgG VF0519 Flagella Motility VFC0204 Single polar flagellum (flgG) flagellar basal-body rod protein FlgG [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_740 74.793 8.89E-133 flgH VF0519 Flagella Motility VFC0204 Single polar flagellum (flgH) flagellar L-ring protein precursor FlgH [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_741 87.393 0.0 flgI VF0519 Flagella Motility VFC0204 Single polar flagellum (flgI) flagellar P-ring protein precursor FlgI [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_742 63.175 2.48E-137 flgJ VF0519 Flagella Motility VFC0204 Single polar flagellum (flgJ) peptidoglycan hydrolase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_743 67.802 0.0 flgK VF0519 Flagella Motility VFC0204 Single polar flagellum (flgK) flagellar hook-associated protein 1 FlgK [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_744 69.27 0.0 flgL VF0519 Flagella Motility VFC0204 Single polar flagellum (flgL) flagellar hook-associated protein 3 FlgL [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_745 76.623 0.0 flaA VF0519 Flagella Motility VFC0204 Single polar flagellum (flaA) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_746 84.127 0.0 flaD VF0519 Flagella Motility VFC0204 Single polar flagellum (flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_784 79.73 2.52E-87 fur VF0113 Fur Regulation VFC0301 (fur) ferric iron uptake transcriptional regulator [Fur (VF0113) - Regulation (VFC0301)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Salmonella enterica (serovar typhimurium)
CP003972.1_871 61.78 1.86E-95 clpP VF0074 ClpP Stress survival VFC0282 21.6 kDa protein belongs to a family of proteases highly conserved in prokaryotes and eukaryotes (clpP) ATP-dependent Clp protease proteolytic subunit [ClpP (VF0074) - Stress survival (VFC0282)] [Listeria monocytogenes EGD-e] Listeria monocytogenes
CP003972.1_931 61.979 0.0 msbA VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (msbA) lipid transporter ATP-binding/permease [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_934 70.356 1.64E-127 nueA VF0473 Polar flagella Motility VFC0204 Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments (nueA) NeuA protein [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
CP003972.1_1017 63.922 0.0 acrB VF0568 AcrAB Antimicrobial activity/Competitive advantage VFC0325 (acrB) acriflavine resistance protein B [AcrAB (VF0568) - Antimicrobial activity/Competitive advantage (VFC0325)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Klebsiella pneumoniae
CP003972.1_1310 69.62 0.0 tssC VF0943 HSI-2 Effector delivery system VFC0086 P. aeruginosa encodes three distinct T6SS loci, H1- to H3-T6SS. While H1-T6SS has only been involved in antibacterial activity so far, H2-T6SS and H3-T6SS can target both bacterial and eukaryotic cells possessing even as said earlier trans-kingdom effectors. (tssC) type VI secretion system contractile sheath large subunit [HSI-2 (VF0943) - Effector delivery system (VFC0086)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
CP003972.1_1464 99.66 0.0 mam7 VF0512 MAM7 Adherence VFC0001 MAM7 is conserved in many Gram-negative bacteria, contains a transmembrane motif at the N terminus and seven mammalian cell entry (mce) domains that are also found in Mycobacterium spp. and some Gram positive bacteria species (mam7) multivalent adhesion molecule MAM7 [MAM7 (VF0512) - Adherence (VFC0001)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1508 99.701 0.0 vopD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vopD) type III secretion system translocator protein VopD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1509 99.749 0.0 vopB VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vopB) type III secretion system translocator protein VopB [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1510 100.0 3.04E-121 vcrH VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrH) type III secretion system chaperone VcrH [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1511 96.694 0.0 vcrV VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrV) type III secretion system needle tip protein VcrV [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1512 100.0 1.08E-64 vcrG VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrG) type III secretion system chaperone VcrG [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1513 98.54 1.05E-100 vcrR VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrR) type III secretion system protein VcrR [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1514 100.0 0.0 vcrD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrD) type III secretion system C ring protein VcrD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1515 98.246 2.33E-80 vscY VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscY) type III secretion system C-ring protein VscY for secretion specificity [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1516 98.4 2.94E-89 vscX VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscX) type III secretion system C-ring protein VscX for secretion specificity [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1517 98.374 2.38E-87 sycN/vcr2 VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (sycN/vcr2) type III secretion system regulatory protein [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1518 100.0 1.05E-62 tyeA/vcr1 VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (tyeA/vcr1) type III secretion system regulatory protein [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1519 99.663 0.0 vopN VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vopN) type III secretion system protein VopN [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1520 99.091 0.0 vscN VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscN) type III secretion system ATPase VscN [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1521 98.693 3.9E-100 vscO VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscO) type III secretion system protein YscO [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1522 95.067 0.0 vscP VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscP) type III secretion system needle length control protein VscP [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1523 98.442 0.0 vscQ VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscQ) type III secretion system cytoplasmic protein VscQ [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1524 100.0 3.02E-156 vscR VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscR) type III secretion system C-ring protein VscR [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1525 100.0 5.62E-57 vscS VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscS) type III secretion system C-ring protein VscS [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1526 100.0 0.0 vscT VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscT) type III secretion system C ring protein VscT [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1527 99.145 0.0 vscU VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscU) type III secretion system C-ring protein VscU [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1532 99.187 0.0 vopQ VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (vopQ) type III secretion system effector VopQ [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003972.1_1533 98.684 2.39E-110 vecA VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vecA) Type III secretion system chaperone VecA [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1534 99.077 0.0 vopR VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (vopR) Type III secretion system effector VopR, phosphoinositide-binding protein [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003972.1_1536 98.966 0.0 vopS VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (vopS) type III secretion system effector VopS, Adenylyltransferase [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003972.1_1538 99.528 4.24E-156 vscL VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscL) type III secretion system cytoplasmic protein VscL [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1539 100.0 6.77E-166 vscK VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscK) type III secretion system cytoplasmic protein VscK [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1540 99.194 0.0 vscJ VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscJ) type III secretion system IM ring protein VscJ [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1541 99.123 4.92E-79 vscI VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscI) type III secretion system inner rod protein VscI [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1542 99.519 9.88E-155 vscH VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscH) type III secretion system protein VscH [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1543 100.0 2.03E-84 vscG VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscG) Type III secretion system chaperone VscG [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1544 100.0 9.84E-56 vscF VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscF) type III secretion system needle protein VscF [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1546 99.538 0.0 vscD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscD) type III secretion system IM ring protein VscD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1547 99.363 0.0 vscC VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscC) type III secretion system OM ring protein VscC [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1548 98.592 3.12E-105 vscB VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscB) type III secretion system regulatory protein, YscB homolog [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1549 99.387 0.0 exsD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (exsD) transcriptional regulator ExsD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1550 99.65 0.0 exsA VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (exsA) transcriptional regulator ExsA [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1551 100.0 1.51E-100 virG VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (virG) Type III secretion system chaperone VscW [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1552 100.0 5.2E-108 vxsC VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vxsC) transcriptional regulator ExsC [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1617 98.854 0.0 vpadF VF0578 VpadF Adherence VFC0001 (vpadF) surface adhesin VpadF [VpadF (VF0578) - Adherence (VFC0001)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003972.1_1884 63.636 5.92E-29 acpXL VF0367 LPS Immune modulation VFC0258 Brucella possesses a non-classical LPS as compared with the so-called classical LPS from enterobacteria such as Escherichia coli. B. abortus lipid A possesses a diaminoglucose backbone (rather than glucosamine), and acyl groups are longer (C28 rather than C12 and C16) and are only linked to the core by amide bounds (rather than ester and amide bonds).; In contrast to enterobacterial LPSs, Brucella LPS is several-hundred-times less active and toxic than E. coli LPS.; this is an evolutionary adaptation to an intracellular lifestyle, low endotoxic activity is shared by other intracellular pathogens such as Bartonella and Legionella. (acpXL) acyl carrier protein [LPS (VF0367) - Immune modulation (VFC0258)] [Brucella melitensis bv. 1 str. 16M] Brucella melitensis
CP003972.1_1885 77.049 8.19E-138 flmH VF0473 Polar flagella Motility VFC0204 Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments (flmH) short chain dehydrogenase/reductase family oxidoreductase [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
CP003972.1_1941 78.983 2.42E-177 motY VF0519 Flagella Motility VFC0204 Single polar flagellum (motY) sodium-type flagellar protein MotY [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_1946 66.146 2.5E-98 sodB VF0169 SodB Stress survival VFC0282 (sodB) superoxide dismutase [SodB (VF0169) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
CP003972.1_2035 92.683 4.69E-111 cheW VF0519 Flagella Motility VFC0204 Single polar flagellum (cheW) purine-binding chemotaxis protein CheW [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2037 62.302 4.57E-121 AHML_RS07540 VF0473 Polar flagella Motility VFC0204 Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments (AHML_RS07540) CobQ/CobB/MinD/ParA family protein [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
CP003972.1_2038 83.82 0.0 cheB VF0519 Flagella Motility VFC0204 Single polar flagellum (cheB) chemotaxis-specific methylesterase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2039 72.613 0.0 cheA VF0519 Flagella Motility VFC0204 Single polar flagellum (cheA) chemotaxis protein CheA [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2040 69.106 4.83E-120 cheZ VF0519 Flagella Motility VFC0204 Single polar flagellum (cheZ) chemotaxis protein CheZ [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2041 97.541 3.12E-85 cheY VF0519 Flagella Motility VFC0204 Single polar flagellum (cheY) chemotaxis protein CheY [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2042 82.787 4.45E-155 fliA VF0519 Flagella Motility VFC0204 Single polar flagellum (fliA) flagellar biosynthesis sigma factor FliA [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2043 91.864 0.0 fleN/flhG VF0519 Flagella Motility VFC0204 Single polar flagellum (fleN/flhG) MinD-like ATPase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2044 74.9 0.0 flhF VF0519 Flagella Motility VFC0204 Single polar flagellum (flhF) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2045 90.415 0.0 flhA VF0519 Flagella Motility VFC0204 Single polar flagellum (flhA) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2046 82.447 0.0 flhB VF0519 Flagella Motility VFC0204 Single polar flagellum (flhB) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2047 78.462 7.77E-157 fliR VF0519 Flagella Motility VFC0204 Single polar flagellum (fliR) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2048 84.27 3.09E-53 fliQ VF0519 Flagella Motility VFC0204 Single polar flagellum (fliQ) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2049 79.779 4.98E-150 fliP VF0519 Flagella Motility VFC0204 Single polar flagellum (fliP) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2050 65.766 1.19E-41 fliO VF0519 Flagella Motility VFC0204 Single polar flagellum (fliO) flagellar protein FliO [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2051 88.971 2.05E-85 fliN VF0519 Flagella Motility VFC0204 Single polar flagellum (fliN) flagellar motor switch protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2052 87.536 0.0 fliM VF0519 Flagella Motility VFC0204 Single polar flagellum (fliM) flagellar motor switch protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2053 75.595 3.11E-89 fliL VF0519 Flagella Motility VFC0204 Single polar flagellum (fliL) flagellar basal body-associated protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2055 69.231 2.95E-73 fliJ VF0519 Flagella Motility VFC0204 Single polar flagellum (fliJ) flagellar protein FliJ [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2056 91.304 0.0 fliI VF0519 Flagella Motility VFC0204 Single polar flagellum (fliI) flagellum-specific ATP synthase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2057 69.925 6.45E-141 fliH VF0519 Flagella Motility VFC0204 Single polar flagellum (fliH) flagellar assembly protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2058 86.994 0.0 fliG VF0519 Flagella Motility VFC0204 Single polar flagellum (fliG) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2059 81.443 0.0 fliF VF0519 Flagella Motility VFC0204 Single polar flagellum (fliF) flagellar M-ring protein FliF [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2060 75.728 1.15E-55 fliE VF0519 Flagella Motility VFC0204 Single polar flagellum (fliE) flagellar hook-basal body protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2061 84.034 0.0 fleR/flrC VF0519 Flagella Motility VFC0204 Single polar flagellum (fleR/flrC) sigma-54 dependent response regulator [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2062 84.29 0.0 fleS/flrB VF0519 Flagella Motility VFC0204 Single polar flagellum (fleS/flrB) sensory box sensor histidine kinase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2063 78.893 0.0 flrA VF0519 Flagella Motility VFC0204 Single polar flagellum (flrA) sigma-54 dependent transcriptional activator [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2065 86.765 9.18E-88 fliS VF0519 Flagella Motility VFC0204 Single polar flagellum (fliS) flagellar protein FliS [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2067 64.732 0.0 fliD VF0519 Flagella Motility VFC0204 Single polar flagellum (fliD) flagellar hook-associated protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2069 82.713 0.0 flaB VF0519 Flagella Motility VFC0204 Single polar flagellum (flaB) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2070 84.127 0.0 flaD VF0519 Flagella Motility VFC0204 Single polar flagellum (flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2071 75.0 0.0 flaE VF0519 Flagella Motility VFC0204 Single polar flagellum (flaE) secreted flagellin involved in biofilm formation [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2097 80.0 6.06E-114 gmhA/lpcA VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (gmhA/lpcA) phosphoheptose isomerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_2117 62.242 1.21E-150 lpxD VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (lpxD) UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_2225 61.012 9.0E-156 galE VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (galE) UDP-glucose 4-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003972.1_2290 74.432 1.92E-165 ompU VF0514 OmpU Adherence VFC0001 Conserved major outer membrane porin, widely present in pathogenic vibrio (ompU) outer membrane protein OmpU [OmpU (VF0514) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
CP003972.1_2346 74.021 0.0 pilB VF0609 ChiRP Adherence VFC0001 Also known as PilA pilus (pilB) type IV-A pilus assembly ATPase PilB [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio vulnificus
CP003972.1_2347 74.321 0.0 pilC VF0609 ChiRP Adherence VFC0001 Also known as PilA pilus (pilC) type II secretion system F family protein [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio vulnificus
CP003972.1_2348 73.264 3.31E-156 pilD/vcpD VF0609 ChiRP Adherence VFC0001 Also known as PilA pilus (pilD/vcpD) A24 family peptidase [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio vulnificus
CP003972.1_2359 88.889 3.2E-118 luxS VF0406 AI-2 Biofilm VFC0271 AI-2 is produced and detected by a wide variety of bacteria and is presumed to facilitate interspecies communications. (luxS) S-ribosylhomocysteinase [AI-2 (VF0406) - Biofilm (VFC0271)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2368 76.271 2.22E-30 csrA VF0261 CsrA Regulation VFC0301 Belongs to a highly conserved family of global regulators that typically control stationary phase traits post-transcriptionally (csrA) carbon storage regulator CsrA [CsrA (VF0261) - Regulation (VFC0301)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
CP003972.1_2375 73.418 2.96E-162 rpoS VF0112 RpoS Regulation VFC0301 (rpoS) RNA polymerase sigma factor RpoS [RpoS (VF0112) - Regulation (VFC0301)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Salmonella enterica (serovar typhimurium)
CP003972.1_2399 64.398 3.13E-91 algU VF0091 Alginate Biofilm VFC0271 Alginate production is frequently referred to as mucoidy because colonies producing alginate have a wet glistening (mucoid) appearance, which is very different from that of colonies not producing alginate; most of the alginate biosynthetic genes are clustered in the algD operon; Alginate production is highly regulated. Regulatory genes are located in two areas far removed from the biosynthetic genes, with one exception algC (algU) alginate biosynthesis protein AlgZ/FimS [Alginate (VF0091) - Biofilm (VFC0271)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
CP003972.1_2433 74.481 0.0 tapT VF0475 Tap type IV pili Adherence VFC0001 Polar; similar to the P. aeruginosa Pil system; constitutively expressed (tapT) twitching ATPase [Tap type IV pili (VF0475) - Adherence (VFC0001)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
CP003972.1_2517 71.499 0.0 mshG VF0515 MSHA pili Adherence VFC0001 (mshG) MSHA biogenesis protein MshG [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2518 77.583 0.0 mshE VF0515 MSHA pili Adherence VFC0001 (mshE) MSHA biogenesis protein MshE [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2520 61.922 1.42E-130 mshM VF0515 MSHA pili Adherence VFC0001 (mshM) MSHA biogenesis protein MshM [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2521 68.093 0.0 mshL VF0515 MSHA pili Adherence VFC0001 (mshL) MSHA biogenesis protein MshL [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2525 61.997 0.0 mshH VF0515 MSHA pili Adherence VFC0001 (mshH) MSHA biogenesis protein MshH [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2599 64.865 2.93E-100 rpe VF0543 Capsule Immune modulation VFC0258 Group 4 capsule; high molecular weight (HMW) O-antigen capsule (rpe) ribulose-phosphate 3-epimerase [Capsule (VF0543) - Immune modulation (VFC0258)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
CP003972.1_2627 77.919 0.0 tufA VF0460 EF-Tu Adherence VFC0001 (tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
CP003972.1_2648 66.337 7.45E-101 vfr VF0082 Type IV pili Adherence VFC0001 PilA, B, C, D, E, F, M, N, O, P, Q, T, U, V, W, X, Y1, Y2, Z, and fimT, U, V are involved in the biogenesis and mechanical function of pili, pilG, H, I, K, chpA, B, C, D, E, pilS, R, fimS, rpoN, algR, algU, and vfr are involved in transcriptional regulation and chemosensory pathways that control the expression or activity of the twitching motility of the pili (vfr) cAMP-regulatory protein [Type IV pili (VF0082) - Adherence (VFC0001)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
CP003972.1_2663 85.308 8.85E-135 motX VF0519 Flagella Motility VFC0204 Single polar flagellum (motX) sodium-type flagellar protein MotX [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003972.1_2701 74.811 0.0 htpB VF0159 Hsp60 Adherence VFC0001 (htpB) Hsp60, 60K heat shock protein HtpB [Hsp60 (VF0159) - Adherence (VFC0001)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
CP003972.1_2764 77.919 0.0 tufA VF0460 EF-Tu Adherence VFC0001 (tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
CP003973.1_216 100.0 0.0 tlh VF0610 TLH Exotoxin VFC0235 High-conserved and widely distributed among Vibrio species; a full-protein of 418 amino acids (MW~47.3 kDa), and a post-transductional modification removes the N-terminal signal peptide, leaving a mature protein of 399 amino acids (tlh) thermolabile hemolysin TLH [TLH (VF0610) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_257 69.349 7.48E-131 lfgG VF0474 Lateral flagella Motility VFC0204 (lfgG) lateral flagellar basal-body rod protein LfgG [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
CP003973.1_258 60.748 1.2E-88 lfgH VF0474 Lateral flagella Motility VFC0204 (lfgH) lateral flagellar L-ring protein, LfgH [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
CP003973.1_275 72.467 0.0 htpB VF0159 Hsp60 Adherence VFC0001 (htpB) Hsp60, 60K heat shock protein HtpB [Hsp60 (VF0159) - Adherence (VFC0001)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
CP003973.1_409 98.793 0.0 VPA0450 VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (VPA0450) type III secretion system effector [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003973.1_410 85.235 3.42E-97 ati1 VF0479 T3SS Effector delivery system VFC0086 Similar to the Yersinia T3SS (ati1) Ati2 chaperone [T3SS (VF0479) - Effector delivery system (VFC0086)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
CP003973.1_412 78.371 0.0 katB VF0168 KatAB Stress survival VFC0282 (katB) catalase-peroxidase KatB [KatAB (VF0168) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
CP003973.1_672 71.946 0.0 VV1_RS15595 VF0612 Flp pili Adherence VFC0001 Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. (VV1_RS15595) pilus assembly protein N-terminal domain-containing protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
CP003973.1_675 86.461 0.0 VV1_RS15610 VF0612 Flp pili Adherence VFC0001 Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. (VV1_RS15610) CpaF family protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
CP003973.1_676 65.246 1.89E-142 VV1_RS15615 VF0612 Flp pili Adherence VFC0001 Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. (VV1_RS15615) type II secretion system F family protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
CP003973.1_715 76.625 0.0 katB VF0168 KatAB Stress survival VFC0282 (katB) catalase-peroxidase KatB [KatAB (VF0168) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
CP003973.1_836 61.834 6.24E-154 galE VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (galE) UDP-glucose 4-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
CP003973.1_1206 100.0 1.26E-143 tdh VF0517 TDH Exotoxin VFC0235 (tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1212 98.37 0.0 vopC VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopC) type III secretion system effector VopC [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003973.1_1218 100.0 3.03E-177 vopT VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopT) type III secretion system effector VopT, ADP-ribosyltransferase [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003973.1_1221 97.959 2.12E-67 VPA1331 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VPA1331) type III secretion system effector and immunogenic protein OspC2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1223 99.51 7.53E-147 vtrA VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vtrA) type III secretion system transcriptional regulator [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1226 100.0 1.94E-49 vscS2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscS2) type III secretion system protein VscS2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1227 100.0 0.0 vopZ VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vopZ) type III secretion system effector VopZ [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1229 99.762 0.0 vscN2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscN2) type III secretion system ATPase VscN2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1230 98.773 0.0 vscC2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscC2) type III secretion system protein VscC2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1231 97.561 5.07E-54 VP_RS21585 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21585) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1232 99.559 5.99E-168 vscT2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscT2) type III secretion system C-ring protein VscT2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1233 99.554 3.02E-164 vscR2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscR2) type III secretion system C-ring protein VscR2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1236 97.924 0.0 vopA/vopP VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopA/vopP) type III secretion system effector VopA, acetyltransferase [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003973.1_1239 100.0 5.47E-132 VP_RS21620 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21620) winged helix-turn-helix domain-containing protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1240 98.592 1.23E-46 vscQ2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscQ2) type III secretion protein VscQ2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1241 95.349 2.08E-151 VP_RS21630 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21630) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1242 100.0 0.0 VP_RS21635 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21635) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1243 100.0 5.57E-94 VP_RS21640 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21640) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1244 99.627 0.0 VPA1353 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VPA1353) type III secretion system outer membrane protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1245 99.715 0.0 vscU2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscU2) type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1246 99.841 0.0 vcrD2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vcrD2) type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1253 99.17 5.94E-177 vopD2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vopD2) type III secretion system translocator protein VopD2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1254 98.854 0.0 vopB2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vopB2) type III secretion system translocator protein VopB2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1255 93.75 6.04E-64 VP_RS21695 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21695) type III secretion system chaperone [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1258 100.0 6.52E-118 VP_RS21705 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21705) hypothetical protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1260 100.0 1.04E-125 vscJ2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscJ2) type III secretion system protein VscJ2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1263 98.967 0.0 vopL VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopL) type III secretion system effector VopL, actin filament nucleation activity [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
CP003973.1_1267 60.654 0.0 acfD VF0127 ACF Others VFC0346 Regulated by the same system that controls expression of cholera toxin; AcfB exhibits sequence similarity with chemotaxis regulatory proteins found in other Gram-negative species. (acfD) accessory colonization factor AcfD [ACF (VF0127) - Others (VFC0346)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
CP003973.1_1270 99.425 1.35E-130 tdh VF0517 TDH Exotoxin VFC0235 (tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1272 99.661 0.0 ospB VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (ospB) type III secretion system effector OspB [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
CP003973.1_1308 74.419 0.0 katA VF0454 KatA Stress survival VFC0282 (katA) catalase [KatA (VF0454) - Stress survival (VFC0282)] [Neisseria meningitidis MC58] Neisseria meningitidis
CP003973.1_1418 60.497 0.0 lfiI VF0474 Lateral flagella Motility VFC0204 (lfiI) lateral flagellar FliI-like assembly ATPase [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
CP003973.1_1427 67.826 1.76E-102 fliP VF0474 Lateral flagella Motility VFC0204 (fliP) flagellar biosynthesis protein FliP [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
CP003973.1_1428 60.674 4.91E-32 fliQ VF0273 Flagella Motility VFC0204 (fliQ) flagellar biosynthetic protein FliQ [Flagella (VF0273) - Motility (VFC0204)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
CP003973.1_1431 62.682 0.0 lfhA VF0474 Lateral flagella Motility VFC0204 (lfhA) lateral flagellar biosynthesis protein [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
CP003973.1_1477 70.309 0.0 gbpA VF0619 GbpA Adherence VFC0001 Mucin contains extensively different types of carbohydrates, the residue, N-acetyl-D-glucosamine (GlcNAc), is one of the most abundant sugars in the carbohydrate side chains (gbpA) N-acetylglucosamine-binding protein GbpA [GbpA (VF0619) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae