2. PATHOGENS
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Pathogen name Scientific name Rank Genomes Strain Safety Level Isolate type
Salmonella enterica non typhoidal serovars Salmonella enterica non typhoidal serovars serogroup 591,766 548,561 Class III / High Human
Salmonella enterica Salmonella enterica species 591,766 548,561 Class III Human
Pathogenic Escherichia coli Escherichia coli species 345,098 264,264 Class III Human
Streptococcus spp. Streptococcus genus 164,553 59,501 Class III Human
Staphylococcus aureus Staphylococcus aureus species 114,105 64,004 Class III Human
Campylobacter jejuni Campylobacter jejuni species 98,946 85,505 Class III Human
Klebsiella pnenmoniae Klebsiella pneumoniae species 93,955 61,136 Class III / High Human
Streptococcus pneumoniae Streptococcus pneumoniae species 77,458 26,281 Class III Human
Listeria monocytogenes Listeria monocytogenes species 67,298 52,299 Class III Human
Streptococcus pyogenes Streptococcus pyogenes species 46,480 17,585 Class III Human
Pseudomonas aeruginosa Pseudomonas aeruginosa species 44,543 29,085 Class III Human
Neisseria gonorrhoeae Neisseria gonorrhoeae species 43,898 35,218 Class III Human
Acinetobacter baumannii Acinetobacter baumannii species 40,312 26,569 Class III Human
Campylobacter coli Campylobacter coli species 37,745 34,110 Class III Human
Shigella sonnei Shigella sonnei species 23,827 21,853 Class III Human
Clostridioides difficile Clostridioides difficile species 22,621 13,095 Class III Human
Shigella flexneri Shigella flexneri species 21,583 19,841 Class III Human
Neisseria meningitidis Neisseria meningitidis species 13,275 5,936 Class III Human
Vibrio parahaemolyticus Vibrio parahaemolyticus species 12,932 11,870 Class III Human
Mycobacterium tuberculosis Mycobacterium tuberculosis species 8,225 6,531 Class II Human
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