2. PATHOGENS
Basic Information
Accession number
GCA_001006105.1
Release date
2015-05-12
Organism
Vibrio parahaemolyticus
Species name
Vibrio parahaemolyticus
Assembly level
Scaffold
Assembly name
ASM100610v1
Assembly submitter
Health Canada
Assembly Type
haploid
Genome size
5.2 Mb
GC percent
45.0
Contig count
155
Collection date
2006
Sample location
Canada: British Columbia
Host
Homo sapiens
Isolation source
-
Isolate type
-
Strain
10-4251
Isolate
-
ARG List
ORF_ID Pass_Bitscore Best_Hit_Bitscore Best_Hit_ARO Best_Identities ARO Model_type SNPs_in_Best_Hit_ARO Other_SNPs Drug class Resistance mechanism AMR gene family Description
JYJS01000144.1_22 # 17335 # 17967 400.0 418.313 CRP 95.24 ARO:3000518 protein homolog model macrolide antibiotic; fluoroquinolone antibiotic; penam antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump CRP is a global regulator that represses MdtEF multidrug efflux pump expression.
JYJS01000032.1_9 # 9077 # 12229 750.0 796.193 adeF 42.09 ARO:3000777 protein homolog model fluoroquinolone antibiotic; tetracycline antibiotic antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH.
JYJS01000043.1_3 # 2029 # 5169 750.0 824.698 adeF 43.83 ARO:3000777 protein homolog model fluoroquinolone antibiotic; tetracycline antibiotic antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH.
JYJS01000043.1_9 # 10004 # 10855 500.0 585.489 CARB-22 100.0 ARO:3003151 protein homolog model penam antibiotic inactivation CARB beta-lactamase CARB-22 is a beta-lactamase. Name originally from the historical Lahey list of beta-lactamases, some of which did not include sequence data.
JYJS01000055.1_327 # 365600 # 367201 710.0 720.694 tet(35) 95.12 ARO:3000481 protein homolog model tetracycline antibiotic antibiotic efflux ATP-binding cassette (ABC) antibiotic efflux pump Tet35 is a tetracycline efflux pump found in the Gram-negative Vibrio and Stenotrophomonas. It is unrelated to other tet resistance genes.
JYJS01000055.1_329 # 369856 # 370812 400.0 536.184 TxR 86.29 ARO:3005008 protein homolog model tetracycline antibiotic antibiotic efflux ATP-binding cassette (ABC) antibiotic efflux pump TxR is a putative transcription regulator that plays a role in conferring tetracycline resistance. It is required for proper functioning of Tet35.
JYJS01000060.1_55 # 59731 # 59928 100.0 102.064 rsmA 90.91 ARO:3005069 protein homolog model fluoroquinolone antibiotic; diaminopyrimidine antibiotic; phenicol antibiotic antibiotic efflux resistance-nodulation-cell division (RND) antibiotic efflux pump rsmA is a gene that regulates virulence of Pseudomonas aeruginosa. However, its negative effect on MexEF-OprN overexpression has been noted to confer resistance to various antibiotics. It's Escherichia coli homolog is csrA.
JYJS01000060.1_326 # 367064 # 367765 50.0 51.6026 vanY gene in vanG cluster 23.27 ARO:3002959 protein homolog model glycopeptide antibiotic antibiotic target alteration vanY; glycopeptide resistance gene cluster Also known as vanYG, is a vanY variant found in the vanG gene cluster.
JYJS01000073.1_36 # 38079 # 39164 175.0 186.422 vanT gene in vanG cluster 33.51 ARO:3002972 protein homolog model glycopeptide antibiotic antibiotic target alteration glycopeptide resistance gene cluster; vanT Also known as vanTG, is a vanT variant found in the vanG gene cluster.
JYJS01000093.1_103 # 126188 # 127981 500.0 523.087 Haemophilus influenzae PBP3 conferring resistance to beta-lactam antibiotics 46.52 ARO:3004446 protein variant model S385T cephalosporin; cephamycin; penam antibiotic target alteration Penicillin-binding protein mutations conferring resistance to beta-lactam antibiotics PBP3 is a penicillin-binding protein and beta-lactam resistance enzyme encoded by the ftsI gene in Haemophilus influenzae. Mutations in ftsI confer resistance to beta-lactam antibiotics.
JYJS01000093.1_123 # 146986 # 148866 1000.0 1060.83 Escherichia coli parE conferring resistance to fluoroquinolones 78.98 ARO:3003316 protein variant model D476N fluoroquinolone antibiotic antibiotic target alteration fluoroquinolone resistant parE Point mutation in Escherichia coli parE resulting in fluoroquinolones resistance.
VF List
Query_id %Identity E-value Related genes VF ID Virulence factor VFcategory VFcategoryID Characteristics Description Strain
JYJS01000109.1_23 99.887 0.0 mam7 VF0512 MAM7 Adherence VFC0001 MAM7 is conserved in many Gram-negative bacteria, contains a transmembrane motif at the N terminus and seven mammalian cell entry (mce) domains that are also found in Mycobacterium spp. and some Gram positive bacteria species (mam7) multivalent adhesion molecule MAM7 [MAM7 (VF0512) - Adherence (VFC0001)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000120.1_1 72.222 3.5E-31 tufA VF0460 EF-Tu Adherence VFC0001 (tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
JYJS01000122.1_37 76.763 0.0 katB VF0168 KatAB Stress survival VFC0282 (katB) catalase-peroxidase KatB [KatAB (VF0168) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
JYJS01000125.1_2 97.34 1.74E-138 tdh VF0517 TDH Exotoxin VFC0235 (tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000132.1_4 100.0 0.0 vopC VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopC) type III secretion system effector VopC [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000134.1_53 90.119 5.17E-158 motA VF0519 Flagella Motility VFC0204 Single polar flagellum (motA) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_54 82.484 0.0 motB VF0519 Flagella Motility VFC0204 Single polar flagellum (motB) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_68 84.758 1.76E-161 IlpA VF0513 IlpA Adherence VFC0001 (IlpA) immunogenic lipoprotein A [IlpA (VF0513) - Adherence (VFC0001)] [Vibrio vulnificus YJ016] Vibrio vulnificus
JYJS01000134.1_109 80.071 4.89E-174 kdsA VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (kdsA) 2-dehydro-3-deoxyphosphooctonate aldolase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000134.1_126 73.867 0.0 flgT VF0519 Flagella Motility VFC0204 Single polar flagellum (flgT) Vibrio-specific flagellar H-ring component FlgT [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_127 85.849 2.38E-141 flgO VF0519 Flagella Motility VFC0204 Single polar flagellum (flgO) Vibrio-specific flagellar H-ring component FlgO [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_128 83.077 4.91E-75 flgP VF0519 Flagella Motility VFC0204 Single polar flagellum (flgP) Vibrio-specific flagellar H-ring component FlgP [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_129 68.794 8.55E-71 flgN VF0519 Flagella Motility VFC0204 Single polar flagellum (flgN) flagellar biosynthesis chaperone FlgN [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_130 63.208 2.67E-42 flgM VF0519 Flagella Motility VFC0204 Single polar flagellum (flgM) negative regulator of flagellin synthesis FlgM, putative [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_132 86.688 0.0 cheV VF0519 Flagella Motility VFC0204 Single polar flagellum (cheV) chemotaxis protein CheV [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_133 93.091 0.0 cheR VF0519 Flagella Motility VFC0204 Single polar flagellum (cheR) chemotaxis protein methyltransferase CheR [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_134 82.443 9.8E-83 flgB VF0519 Flagella Motility VFC0204 Single polar flagellum (flgB) flagellar basal body rod protein FlgB [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_135 89.13 1.75E-86 flgC VF0519 Flagella Motility VFC0204 Single polar flagellum (flgC) flagellar basal body rod protein FlgC [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_136 84.681 7.57E-146 flgD VF0519 Flagella Motility VFC0204 Single polar flagellum (flgD) flagellar basal-body rod modification protein FlgD [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_137 81.693 0.0 flgE VF0519 Flagella Motility VFC0204 Single polar flagellum (flgE) flagellar hook protein FlgE [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_138 81.526 2.45E-154 flgF VF0519 Flagella Motility VFC0204 Single polar flagellum (flgF) flagellar basal-body rod protein FlgF [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_139 85.878 5.42E-173 flgG VF0519 Flagella Motility VFC0204 Single polar flagellum (flgG) flagellar basal-body rod protein FlgG [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_140 74.793 8.89E-133 flgH VF0519 Flagella Motility VFC0204 Single polar flagellum (flgH) flagellar L-ring protein precursor FlgH [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_141 87.393 0.0 flgI VF0519 Flagella Motility VFC0204 Single polar flagellum (flgI) flagellar P-ring protein precursor FlgI [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_142 63.175 2.48E-137 flgJ VF0519 Flagella Motility VFC0204 Single polar flagellum (flgJ) peptidoglycan hydrolase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_143 67.802 0.0 flgK VF0519 Flagella Motility VFC0204 Single polar flagellum (flgK) flagellar hook-associated protein 1 FlgK [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_144 69.27 0.0 flgL VF0519 Flagella Motility VFC0204 Single polar flagellum (flgL) flagellar hook-associated protein 3 FlgL [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000134.1_145 76.623 0.0 flaA VF0519 Flagella Motility VFC0204 Single polar flagellum (flaA) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000142.1_1 90.761 2.89E-116 flaD VF0519 Flagella Motility VFC0204 Single polar flagellum (flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000143.1_1 75.649 9.79E-166 tufA VF0460 EF-Tu Adherence VFC0001 (tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
JYJS01000144.1_1 72.222 3.5E-31 tufA VF0460 EF-Tu Adherence VFC0001 (tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
JYJS01000144.1_22 66.337 7.45E-101 vfr VF0082 Type IV pili Adherence VFC0001 PilA, B, C, D, E, F, M, N, O, P, Q, T, U, V, W, X, Y1, Y2, Z, and fimT, U, V are involved in the biogenesis and mechanical function of pili, pilG, H, I, K, chpA, B, C, D, E, pilS, R, fimS, rpoN, algR, algU, and vfr are involved in transcriptional regulation and chemosensory pathways that control the expression or activity of the twitching motility of the pili (vfr) cAMP-regulatory protein [Type IV pili (VF0082) - Adherence (VFC0001)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
JYJS01000144.1_37 84.834 1.26E-134 motX VF0519 Flagella Motility VFC0204 Single polar flagellum (motX) sodium-type flagellar protein MotX [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000144.1_75 74.811 0.0 htpB VF0159 Hsp60 Adherence VFC0001 (htpB) Hsp60, 60K heat shock protein HtpB [Hsp60 (VF0159) - Adherence (VFC0001)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
JYJS01000147.1_1 60.0 7.01E-12 sigA/rpoV VF0257 SigA Regulation VFC0301 In M. tuberculosis, 13 sigma factor genes have been annotated in the genome, 9 of which belong to a special subfamily thought to direct extracytoplasmic functions and various other stress responses (temperature, oxidative stress, pH, and infection of macrophages); sigma A also known as RpoV, is the essential principal mycobacterial sigma factors, necessary for most mycobacterial housekeeping gene transcription; It was the first mycobacterial sigma factor to be associated with virulence (sigA/rpoV) RNA polymerase sigma factor SigA [SigA (VF0257) - Regulation (VFC0301)] [Mycobacterium tuberculosis H37Rv] Mycobacterium tuberculosis
JYJS01000033.1_18 62.536 0.0 lfhA VF0474 Lateral flagella Motility VFC0204 (lfhA) lateral flagellar biosynthesis protein [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
JYJS01000033.1_21 60.674 4.91E-32 fliQ VF0273 Flagella Motility VFC0204 (fliQ) flagellar biosynthetic protein FliQ [Flagella (VF0273) - Motility (VFC0204)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
JYJS01000033.1_22 67.826 1.76E-102 fliP VF0474 Lateral flagella Motility VFC0204 (fliP) flagellar biosynthesis protein FliP [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
JYJS01000036.1_11 74.481 0.0 tapT VF0475 Tap type IV pili Adherence VFC0001 Polar; similar to the P. aeruginosa Pil system; constitutively expressed (tapT) twitching ATPase [Tap type IV pili (VF0475) - Adherence (VFC0001)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
JYJS01000044.1_1 76.667 4.32E-15 vipB VF0480 T6SS Effector delivery system VFC0086 (vipB) Type VI secretion system contractile sheath large subunit TssC/VipB [T6SS (VF0480) - Effector delivery system (VFC0086)] [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Aeromonas hydrophila
JYJS01000046.1_23 71.946 0.0 VV1_RS15595 VF0612 Flp pili Adherence VFC0001 Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. (VV1_RS15595) pilus assembly protein N-terminal domain-containing protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
JYJS01000046.1_26 86.461 0.0 VV1_RS15610 VF0612 Flp pili Adherence VFC0001 Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. (VV1_RS15610) CpaF family protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
JYJS01000046.1_27 64.918 3.41E-142 VV1_RS15615 VF0612 Flp pili Adherence VFC0001 Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. (VV1_RS15615) type II secretion system F family protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
JYJS01000047.1_1 75.132 1.86E-97 flaD VF0519 Flagella Motility VFC0204 Single polar flagellum (flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000048.1_10 61.834 1.76E-153 galE VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (galE) UDP-glucose 4-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000055.1_1 78.632 9.05E-130 flaD VF0519 Flagella Motility VFC0204 Single polar flagellum (flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000055.1_40 79.73 2.52E-87 fur VF0113 Fur Regulation VFC0301 (fur) ferric iron uptake transcriptional regulator [Fur (VF0113) - Regulation (VFC0301)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Salmonella enterica (serovar typhimurium)
JYJS01000055.1_119 61.78 1.86E-95 clpP VF0074 ClpP Stress survival VFC0282 21.6 kDa protein belongs to a family of proteases highly conserved in prokaryotes and eukaryotes (clpP) ATP-dependent Clp protease proteolytic subunit [ClpP (VF0074) - Stress survival (VFC0282)] [Listeria monocytogenes EGD-e] Listeria monocytogenes
JYJS01000055.1_180 61.979 0.0 msbA VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (msbA) lipid transporter ATP-binding/permease [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000055.1_183 70.356 1.64E-127 nueA VF0473 Polar flagella Motility VFC0204 Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments (nueA) NeuA protein [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
JYJS01000055.1_286 63.922 0.0 acrB VF0568 AcrAB Antimicrobial activity/Competitive advantage VFC0325 (acrB) acriflavine resistance protein B [AcrAB (VF0568) - Antimicrobial activity/Competitive advantage (VFC0325)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Klebsiella pneumoniae
JYJS01000060.1_24 64.398 1.45E-91 algU VF0091 Alginate Biofilm VFC0271 Alginate production is frequently referred to as mucoidy because colonies producing alginate have a wet glistening (mucoid) appearance, which is very different from that of colonies not producing alginate; most of the alginate biosynthetic genes are clustered in the algD operon; Alginate production is highly regulated. Regulatory genes are located in two areas far removed from the biosynthetic genes, with one exception algC (algU) alginate biosynthesis protein AlgZ/FimS [Alginate (VF0091) - Biofilm (VFC0271)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
JYJS01000060.1_48 75.949 9.28E-171 rpoS VF0112 RpoS Regulation VFC0301 (rpoS) RNA polymerase sigma factor RpoS [RpoS (VF0112) - Regulation (VFC0301)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Salmonella enterica (serovar typhimurium)
JYJS01000060.1_55 76.271 2.22E-30 csrA VF0261 CsrA Regulation VFC0301 Belongs to a highly conserved family of global regulators that typically control stationary phase traits post-transcriptionally (csrA) carbon storage regulator CsrA [CsrA (VF0261) - Regulation (VFC0301)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
JYJS01000060.1_64 88.889 3.2E-118 luxS VF0406 AI-2 Biofilm VFC0271 AI-2 is produced and detected by a wide variety of bacteria and is presumed to facilitate interspecies communications. (luxS) S-ribosylhomocysteinase [AI-2 (VF0406) - Biofilm (VFC0271)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000060.1_75 73.264 4.91E-156 pilD/vcpD VF0609 ChiRP Adherence VFC0001 Also known as PilA pilus (pilD/vcpD) A24 family peptidase [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio vulnificus
JYJS01000060.1_76 74.321 0.0 pilC VF0609 ChiRP Adherence VFC0001 Also known as PilA pilus (pilC) type II secretion system F family protein [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio vulnificus
JYJS01000060.1_77 73.665 0.0 pilB VF0609 ChiRP Adherence VFC0001 Also known as PilA pilus (pilB) type IV-A pilus assembly ATPase PilB [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio vulnificus
JYJS01000060.1_132 74.432 1.92E-165 ompU VF0514 OmpU Adherence VFC0001 Conserved major outer membrane porin, widely present in pathogenic vibrio (ompU) outer membrane protein OmpU [OmpU (VF0514) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] Vibrio vulnificus
JYJS01000060.1_197 60.417 4.72E-154 galE VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (galE) UDP-glucose 4-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000060.1_288 62.537 2.88E-151 lpxD VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (lpxD) UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000060.1_308 80.0 6.06E-114 gmhA/lpcA VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (gmhA/lpcA) phosphoheptose isomerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000060.1_334 74.202 0.0 flaE VF0519 Flagella Motility VFC0204 Single polar flagellum (flaE) secreted flagellin involved in biofilm formation [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000061.1_50 77.049 9.14E-138 flmH VF0473 Polar flagella Motility VFC0204 Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments (flmH) short chain dehydrogenase/reductase family oxidoreductase [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
JYJS01000061.1_51 63.636 5.92E-29 acpXL VF0367 LPS Immune modulation VFC0258 Brucella possesses a non-classical LPS as compared with the so-called classical LPS from enterobacteria such as Escherichia coli. B. abortus lipid A possesses a diaminoglucose backbone (rather than glucosamine), and acyl groups are longer (C28 rather than C12 and C16) and are only linked to the core by amide bounds (rather than ester and amide bonds).; In contrast to enterobacterial LPSs, Brucella LPS is several-hundred-times less active and toxic than E. coli LPS.; this is an evolutionary adaptation to an intracellular lifestyle, low endotoxic activity is shared by other intracellular pathogens such as Bartonella and Legionella. (acpXL) acyl carrier protein [LPS (VF0367) - Immune modulation (VFC0258)] [Brucella melitensis bv. 1 str. 16M] Brucella melitensis
JYJS01000070.1_16 78.652 0.0 katB VF0168 KatAB Stress survival VFC0282 (katB) catalase-peroxidase KatB [KatAB (VF0168) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
JYJS01000070.1_18 85.906 7.12E-98 ati1 VF0479 T3SS Effector delivery system VFC0086 Similar to the Yersinia T3SS (ati1) Ati2 chaperone [T3SS (VF0479) - Effector delivery system (VFC0086)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
JYJS01000070.1_19 100.0 0.0 VPA0450 VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (VPA0450) type III secretion system effector [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000071.1_1 100.0 0.0 ospB VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (ospB) type III secretion system effector OspB [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000071.1_37 74.419 0.0 katA VF0454 KatA Stress survival VFC0282 (katA) catalase [KatA (VF0454) - Stress survival (VFC0282)] [Neisseria meningitidis MC58] Neisseria meningitidis
JYJS01000072.1_36 70.309 0.0 gbpA VF0619 GbpA Adherence VFC0001 Mucin contains extensively different types of carbohydrates, the residue, N-acetyl-D-glucosamine (GlcNAc), is one of the most abundant sugars in the carbohydrate side chains (gbpA) N-acetylglucosamine-binding protein GbpA [GbpA (VF0619) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000073.1_1 86.598 1.34E-57 tufA VF0460 EF-Tu Adherence VFC0001 (tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
JYJS01000073.1_29 64.865 1.15E-99 rpe VF0543 Capsule Immune modulation VFC0258 Group 4 capsule; high molecular weight (HMW) O-antigen capsule (rpe) ribulose-phosphate 3-epimerase [Capsule (VF0543) - Immune modulation (VFC0258)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
JYJS01000075.1_52 60.89 0.0 icl VF0253 Isocitrate lyase Others VFC0346 (icl) Isocitrate lyase Icl (isocitrase) (isocitratase) [Isocitrate lyase (VF0253) - Others (VFC0346)] [Mycobacterium tuberculosis H37Rv] Mycobacterium tuberculosis
JYJS01000077.1_137 72.467 0.0 htpB VF0159 Hsp60 Adherence VFC0001 (htpB) Hsp60, 60K heat shock protein HtpB [Hsp60 (VF0159) - Adherence (VFC0001)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
JYJS01000077.1_154 60.748 1.2E-88 lfgH VF0474 Lateral flagella Motility VFC0204 (lfgH) lateral flagellar L-ring protein, LfgH [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
JYJS01000077.1_155 69.349 7.48E-131 lfgG VF0474 Lateral flagella Motility VFC0204 (lfgG) lateral flagellar basal-body rod protein LfgG [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
JYJS01000077.1_195 100.0 0.0 tlh VF0610 TLH Exotoxin VFC0235 High-conserved and widely distributed among Vibrio species; a full-protein of 418 amino acids (MW~47.3 kDa), and a post-transductional modification removes the N-terminal signal peptide, leaving a mature protein of 399 amino acids (tlh) thermolabile hemolysin TLH [TLH (VF0610) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000078.1_69 71.499 0.0 mshG VF0515 MSHA pili Adherence VFC0001 (mshG) MSHA biogenesis protein MshG [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000078.1_70 77.583 0.0 mshE VF0515 MSHA pili Adherence VFC0001 (mshE) MSHA biogenesis protein MshE [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000078.1_72 62.278 5.43E-131 mshM VF0515 MSHA pili Adherence VFC0001 (mshM) MSHA biogenesis protein MshM [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000078.1_73 68.271 0.0 mshL VF0515 MSHA pili Adherence VFC0001 (mshL) MSHA biogenesis protein MshL [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000078.1_77 61.997 0.0 mshH VF0515 MSHA pili Adherence VFC0001 (mshH) MSHA biogenesis protein MshH [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000079.1_4 100.0 2.7E-9 tdh VF0517 TDH Exotoxin VFC0235 (tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000080.1_153 69.62 0.0 tssC VF0943 HSI-2 Effector delivery system VFC0086 P. aeruginosa encodes three distinct T6SS loci, H1- to H3-T6SS. While H1-T6SS has only been involved in antibacterial activity so far, H2-T6SS and H3-T6SS can target both bacterial and eukaryotic cells possessing even as said earlier trans-kingdom effectors. (tssC) type VI secretion system contractile sheath large subunit [HSI-2 (VF0943) - Effector delivery system (VFC0086)] [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa
JYJS01000081.1_1 100.0 2.7E-9 tdh VF0517 TDH Exotoxin VFC0235 (tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000084.1_8 78.983 2.42E-177 motY VF0519 Flagella Motility VFC0204 Single polar flagellum (motY) sodium-type flagellar protein MotY [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_13 66.146 2.5E-98 sodB VF0169 SodB Stress survival VFC0282 (sodB) superoxide dismutase [SodB (VF0169) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Legionella pneumophila
JYJS01000084.1_115 92.683 4.69E-111 cheW VF0519 Flagella Motility VFC0204 Single polar flagellum (cheW) purine-binding chemotaxis protein CheW [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_117 62.302 4.57E-121 AHML_RS07540 VF0473 Polar flagella Motility VFC0204 Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments (AHML_RS07540) CobQ/CobB/MinD/ParA family protein [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] Aeromonas hydrophila
JYJS01000084.1_118 83.82 0.0 cheB VF0519 Flagella Motility VFC0204 Single polar flagellum (cheB) chemotaxis-specific methylesterase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_119 72.739 0.0 cheA VF0519 Flagella Motility VFC0204 Single polar flagellum (cheA) chemotaxis protein CheA [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_120 69.106 4.83E-120 cheZ VF0519 Flagella Motility VFC0204 Single polar flagellum (cheZ) chemotaxis protein CheZ [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_121 97.541 3.12E-85 cheY VF0519 Flagella Motility VFC0204 Single polar flagellum (cheY) chemotaxis protein CheY [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_122 82.787 4.45E-155 fliA VF0519 Flagella Motility VFC0204 Single polar flagellum (fliA) flagellar biosynthesis sigma factor FliA [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_123 91.864 0.0 fleN/flhG VF0519 Flagella Motility VFC0204 Single polar flagellum (fleN/flhG) MinD-like ATPase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_124 74.9 0.0 flhF VF0519 Flagella Motility VFC0204 Single polar flagellum (flhF) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_125 90.415 0.0 flhA VF0519 Flagella Motility VFC0204 Single polar flagellum (flhA) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_126 82.447 0.0 flhB VF0519 Flagella Motility VFC0204 Single polar flagellum (flhB) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_127 78.462 7.77E-157 fliR VF0519 Flagella Motility VFC0204 Single polar flagellum (fliR) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_128 84.27 3.09E-53 fliQ VF0519 Flagella Motility VFC0204 Single polar flagellum (fliQ) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_129 79.636 5.81E-150 fliP VF0519 Flagella Motility VFC0204 Single polar flagellum (fliP) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_130 65.766 1.19E-41 fliO VF0519 Flagella Motility VFC0204 Single polar flagellum (fliO) flagellar protein FliO [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_131 88.971 2.05E-85 fliN VF0519 Flagella Motility VFC0204 Single polar flagellum (fliN) flagellar motor switch protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_132 87.536 0.0 fliM VF0519 Flagella Motility VFC0204 Single polar flagellum (fliM) flagellar motor switch protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_133 75.595 3.11E-89 fliL VF0519 Flagella Motility VFC0204 Single polar flagellum (fliL) flagellar basal body-associated protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_135 69.231 2.95E-73 fliJ VF0519 Flagella Motility VFC0204 Single polar flagellum (fliJ) flagellar protein FliJ [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_136 91.304 0.0 fliI VF0519 Flagella Motility VFC0204 Single polar flagellum (fliI) flagellum-specific ATP synthase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_137 69.549 1.08E-139 fliH VF0519 Flagella Motility VFC0204 Single polar flagellum (fliH) flagellar assembly protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_138 86.994 0.0 fliG VF0519 Flagella Motility VFC0204 Single polar flagellum (fliG) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_139 81.443 0.0 fliF VF0519 Flagella Motility VFC0204 Single polar flagellum (fliF) flagellar M-ring protein FliF [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_140 75.728 1.15E-55 fliE VF0519 Flagella Motility VFC0204 Single polar flagellum (fliE) flagellar hook-basal body protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_141 84.034 0.0 fleR/flrC VF0519 Flagella Motility VFC0204 Single polar flagellum (fleR/flrC) sigma-54 dependent response regulator [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_142 84.29 0.0 fleS/flrB VF0519 Flagella Motility VFC0204 Single polar flagellum (fleS/flrB) sensory box sensor histidine kinase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_143 78.893 0.0 flrA VF0519 Flagella Motility VFC0204 Single polar flagellum (flrA) sigma-54 dependent transcriptional activator [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_145 86.765 9.18E-88 fliS VF0519 Flagella Motility VFC0204 Single polar flagellum (fliS) flagellar protein FliS [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_147 64.881 0.0 fliD VF0519 Flagella Motility VFC0204 Single polar flagellum (fliD) flagellar hook-associated protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_149 82.713 0.0 flaB VF0519 Flagella Motility VFC0204 Single polar flagellum (flaB) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000084.1_150 94.915 8.41E-33 flaD VF0519 Flagella Motility VFC0204 Single polar flagellum (flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000088.1_7 60.497 0.0 lfiI VF0474 Lateral flagella Motility VFC0204 (lfiI) lateral flagellar FliI-like assembly ATPase [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] Aeromonas salmonicida
JYJS01000089.1_1 86.598 1.34E-57 tufA VF0460 EF-Tu Adherence VFC0001 (tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
JYJS01000090.1_2 100.0 1.2E-131 tdh VF0517 TDH Exotoxin VFC0235 (tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_6 60.588 0.0 acfD VF0127 ACF Others VFC0346 Regulated by the same system that controls expression of cholera toxin; AcfB exhibits sequence similarity with chemotaxis regulatory proteins found in other Gram-negative species. (acfD) accessory colonization factor AcfD [ACF (VF0127) - Others (VFC0346)] [Vibrio cholerae O1 biovar El Tor str. N16961] Vibrio cholerae
JYJS01000090.1_10 100.0 0.0 vopL VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopL) type III secretion system effector VopL, actin filament nucleation activity [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000090.1_13 100.0 1.04E-125 vscJ2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscJ2) type III secretion system protein VscJ2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_15 100.0 6.52E-118 VP_RS21705 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21705) hypothetical protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_17 100.0 1.76E-68 VP_RS21695 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21695) type III secretion system chaperone [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_18 100.0 0.0 vopB2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vopB2) type III secretion system translocator protein VopB2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_19 100.0 7.61E-180 vopD2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vopD2) type III secretion system translocator protein VopD2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_26 100.0 0.0 vcrD2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vcrD2) type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_27 100.0 0.0 vscU2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscU2) type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_28 100.0 0.0 VPA1353 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VPA1353) type III secretion system outer membrane protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_29 100.0 5.57E-94 VP_RS21640 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21640) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_30 100.0 0.0 VP_RS21635 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21635) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_31 100.0 2.82E-160 VP_RS21630 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21630) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_32 100.0 9.12E-47 vscQ2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscQ2) type III secretion protein VscQ2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_33 100.0 5.47E-132 VP_RS21620 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21620) winged helix-turn-helix domain-containing protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_35 100.0 0.0 vopA/vopP VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopA/vopP) type III secretion system effector VopA, acetyltransferase [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000090.1_38 100.0 7.25E-165 vscR2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscR2) type III secretion system C-ring protein VscR2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_39 100.0 3.69E-169 vscT2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscT2) type III secretion system C-ring protein VscT2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_40 100.0 8.66E-55 VP_RS21585 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VP_RS21585) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_41 100.0 0.0 vscC2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscC2) type III secretion system protein VscC2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_42 100.0 0.0 vscN2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscN2) type III secretion system ATPase VscN2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_44 100.0 0.0 vopZ VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vopZ) type III secretion system effector VopZ [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_45 100.0 1.94E-49 vscS2 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vscS2) type III secretion system protein VscS2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_48 99.51 7.53E-147 vtrA VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (vtrA) type III secretion system transcriptional regulator [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_50 100.0 6.06E-69 VPA1331 VF0409 T3SS2 Effector delivery system VFC0086 Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella (VPA1331) type III secretion system effector and immunogenic protein OspC2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000090.1_53 100.0 3.03E-177 vopT VF0633 T3SS2 secreted effectors Effector delivery system VFC0086 (vopT) type III secretion system effector VopT, ADP-ribosyltransferase [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000091.1_13 100.0 0.0 vpadF VF0578 VpadF Adherence VFC0001 (vpadF) surface adhesin VpadF [VpadF (VF0578) - Adherence (VFC0001)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_78 100.0 5.2E-108 vxsC VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vxsC) transcriptional regulator ExsC [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_79 100.0 1.51E-100 virG VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (virG) Type III secretion system chaperone VscW [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_80 100.0 0.0 exsA VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (exsA) transcriptional regulator ExsA [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_81 100.0 0.0 exsD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (exsD) transcriptional regulator ExsD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_82 100.0 2.24E-106 vscB VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscB) type III secretion system regulatory protein, YscB homolog [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_83 100.0 0.0 vscC VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscC) type III secretion system OM ring protein VscC [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_84 100.0 0.0 vscD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscD) type III secretion system IM ring protein VscD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_86 100.0 9.84E-56 vscF VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscF) type III secretion system needle protein VscF [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_87 100.0 2.03E-84 vscG VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscG) Type III secretion system chaperone VscG [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_88 100.0 7.5E-156 vscH VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscH) type III secretion system protein VscH [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_89 100.0 1.97E-80 vscI VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscI) type III secretion system inner rod protein VscI [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_90 100.0 0.0 vscJ VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscJ) type III secretion system IM ring protein VscJ [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_91 100.0 6.77E-166 vscK VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscK) type III secretion system cytoplasmic protein VscK [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_92 100.0 1.3E-156 vscL VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscL) type III secretion system cytoplasmic protein VscL [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_94 100.0 0.0 vopS VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (vopS) type III secretion system effector VopS, Adenylyltransferase [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000091.1_96 100.0 0.0 vopR VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (vopR) Type III secretion system effector VopR, phosphoinositide-binding protein [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000091.1_97 100.0 1.42E-111 vecA VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vecA) Type III secretion system chaperone VecA [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_98 100.0 0.0 vopQ VF0632 T3SS1 secreted effectors Effector delivery system VFC0086 (vopQ) type III secretion system effector VopQ [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio cholerae
JYJS01000091.1_103 100.0 0.0 vscU VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscU) type III secretion system C-ring protein VscU [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_104 100.0 0.0 vscT VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscT) type III secretion system C ring protein VscT [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_105 100.0 5.62E-57 vscS VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscS) type III secretion system C-ring protein VscS [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_106 100.0 3.02E-156 vscR VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscR) type III secretion system C-ring protein VscR [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_107 100.0 0.0 vscQ VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscQ) type III secretion system cytoplasmic protein VscQ [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_108 100.0 0.0 vscP VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscP) type III secretion system needle length control protein VscP [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_109 100.0 1.32E-100 vscO VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscO) type III secretion system protein YscO [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_110 99.773 0.0 vscN VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscN) type III secretion system ATPase VscN [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_111 100.0 0.0 vopN VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vopN) type III secretion system protein VopN [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_112 100.0 1.05E-62 tyeA/vcr1 VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (tyeA/vcr1) type III secretion system regulatory protein [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_113 100.0 4.53E-89 sycN/vcr2 VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (sycN/vcr2) type III secretion system regulatory protein [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_114 100.0 4.84E-91 vscX VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscX) type III secretion system C-ring protein VscX for secretion specificity [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_115 100.0 3.8E-81 vscY VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vscY) type III secretion system C-ring protein VscY for secretion specificity [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_116 100.0 0.0 vcrD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrD) type III secretion system C ring protein VcrD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_117 100.0 3.2E-102 vcrR VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrR) type III secretion system protein VcrR [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_118 100.0 1.08E-64 vcrG VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrG) type III secretion system chaperone VcrG [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_119 100.0 0.0 vcrV VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrV) type III secretion system needle tip protein VcrV [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_120 100.0 3.04E-121 vcrH VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vcrH) type III secretion system chaperone VcrH [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_121 100.0 0.0 vopB VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vopB) type III secretion system translocator protein VopB [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000091.1_122 100.0 0.0 vopD VF0408 T3SS1 Effector delivery system VFC0086 Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 (vopD) type III secretion system translocator protein VopD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] Vibrio parahaemolyticus
JYJS01000093.1_92 74.342 2.1E-173 lpxC VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (lpxC) UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000093.1_129 65.021 0.0 rfaE VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (rfaE) ADP-heptose synthase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000093.1_305 78.608 0.0 ugd VF0560 Capsule Immune modulation VFC0258 The Klebsiella polysaccharide capsule is produced through a Wzy-dependent process, for which the synthesis and export machinery are encoded in a single 10-30 kb region of the genome known as the K locus.; 78 distinct capsule phenotypes have been recognized by serological typing, but many isolates are serologically non-typable.; capsular serotypes vary substantially in the degree of serum resistance; K1, K2 and K5 are highly serum resistant and are associated with hypervirulent strains that differ from classical K. pneumoniae in that they commonly cause community-acquired disease. (ugd) UDP-glucose 6-dehydrogenase [Capsule (VF0560) - Immune modulation (VFC0258)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Klebsiella pneumoniae
JYJS01000093.1_318 62.759 5.19E-138 wbtL VF0542 LPS Immune modulation VFC0258 The structure of Francisella spp. lipid A is unique in that it is modified by various carbohydrates that greatly reduce TLR4 activation and allow for immune evasion (wbtL) glucose-1-phosphate thymidylyltransferase [LPS (VF0542) - Immune modulation (VFC0258)] [Francisella tularensis subsp. tularensis SCHU S4] Francisella tularensis
JYJS01000093.1_319 60.058 6.68E-154 rffG VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (rffG) dTDP-glucose 46-dehydratase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000093.1_327 73.397 1.01E-169 rfaD VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (rfaD) ADP-L-glycero-D-mannoheptose-6-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000093.1_348 63.095 6.25E-115 lgtF VF0044 LOS Immune modulation VFC0258 Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. (lgtF) beta-1,4-glucosyltransferase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] Haemophilus influenzae
JYJS01000093.1_399 66.071 7.77E-157 epsK VF0613 Eps T2SS Effector delivery system VFC0086 (epsK) type II secretion system minor pseudopilin GspK [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
JYJS01000093.1_400 62.78 2.49E-101 epsJ VF0613 Eps T2SS Effector delivery system VFC0086 (epsJ) type II secretion system minor pseudopilin GspJ [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
JYJS01000093.1_401 80.357 5.12E-62 epsI VF0613 Eps T2SS Effector delivery system VFC0086 (epsI) type II secretion system minor pseudopilin GspI [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
JYJS01000093.1_403 90.278 2.03E-95 epsG VF0613 Eps T2SS Effector delivery system VFC0086 (epsG) type II secretion system major pseudopilin GspG [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
JYJS01000093.1_404 79.259 0.0 epsF VF0613 Eps T2SS Effector delivery system VFC0086 (epsF) type II secretion system inner membrane protein GspF [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
JYJS01000093.1_405 84.114 0.0 epsE VF0613 Eps T2SS Effector delivery system VFC0086 (epsE) type II secretion system ATPase GspE [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae
JYJS01000093.1_406 81.899 0.0 epsD VF0613 Eps T2SS Effector delivery system VFC0086 (epsD) type II secretion system secretin GspD [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] Vibrio cholerae