| LBHG01000001.1_268 |
69.897 |
0.0 |
gbpA |
VF0619 |
GbpA |
Adherence |
VFC0001 |
Mucin contains extensively different types of carbohydrates, the residue, N-acetyl-D-glucosamine (GlcNAc), is one of the most abundant sugars in the carbohydrate side chains |
(gbpA) N-acetylglucosamine-binding protein GbpA [GbpA (VF0619) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000001.1_316 |
62.682 |
0.0 |
lfhA |
VF0474 |
Lateral flagella |
Motility |
VFC0204 |
|
(lfhA) lateral flagellar biosynthesis protein [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] |
Aeromonas salmonicida |
| LBHG01000001.1_319 |
60.674 |
4.91E-32 |
fliQ |
VF0273 |
Flagella |
Motility |
VFC0204 |
|
(fliQ) flagellar biosynthetic protein FliQ [Flagella (VF0273) - Motility (VFC0204)] [Pseudomonas aeruginosa PAO1] |
Pseudomonas aeruginosa |
| LBHG01000001.1_320 |
67.826 |
1.76E-102 |
fliP |
VF0474 |
Lateral flagella |
Motility |
VFC0204 |
|
(fliP) flagellar biosynthesis protein FliP [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] |
Aeromonas salmonicida |
| LBHG01000001.1_329 |
60.497 |
0.0 |
lfiI |
VF0474 |
Lateral flagella |
Motility |
VFC0204 |
|
(lfiI) lateral flagellar FliI-like assembly ATPase [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] |
Aeromonas salmonicida |
| LBHG01000001.1_438 |
74.419 |
0.0 |
katA |
VF0454 |
KatA |
Stress survival |
VFC0282 |
|
(katA) catalase [KatA (VF0454) - Stress survival (VFC0282)] [Neisseria meningitidis MC58] |
Neisseria meningitidis |
| LBHG01000001.1_500 |
99.598 |
0.0 |
VPA0450 |
VF0632 |
T3SS1 secreted effectors |
Effector delivery system |
VFC0086 |
|
(VPA0450) type III secretion system effector [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio cholerae |
| LBHG01000001.1_501 |
84.564 |
6.9E-97 |
ati1 |
VF0479 |
T3SS |
Effector delivery system |
VFC0086 |
Similar to the Yersinia T3SS |
(ati1) Ati2 chaperone [T3SS (VF0479) - Effector delivery system (VFC0086)] [Aeromonas salmonicida subsp. salmonicida A449] |
Aeromonas salmonicida |
| LBHG01000001.1_503 |
78.933 |
0.0 |
katB |
VF0168 |
KatAB |
Stress survival |
VFC0282 |
|
(katB) catalase-peroxidase KatB [KatAB (VF0168) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
Legionella pneumophila |
| LBHG01000010.1_23 |
61.78 |
1.86E-95 |
clpP |
VF0074 |
ClpP |
Stress survival |
VFC0282 |
21.6 kDa protein belongs to a family of proteases highly conserved in prokaryotes and eukaryotes |
(clpP) ATP-dependent Clp protease proteolytic subunit [ClpP (VF0074) - Stress survival (VFC0282)] [Listeria monocytogenes EGD-e] |
Listeria monocytogenes |
| LBHG01000010.1_105 |
79.73 |
2.52E-87 |
fur |
VF0113 |
Fur |
Regulation |
VFC0301 |
|
(fur) ferric iron uptake transcriptional regulator [Fur (VF0113) - Regulation (VFC0301)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
Salmonella enterica (serovar typhimurium) |
| LBHG01000010.1_153 |
90.323 |
1.01E-12 |
flaD |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000011.1_27 |
100.0 |
0.0 |
vopD |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vopD) type III secretion system translocator protein VopD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_28 |
100.0 |
0.0 |
vopB |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vopB) type III secretion system translocator protein VopB [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_29 |
100.0 |
3.04E-121 |
vcrH |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vcrH) type III secretion system chaperone VcrH [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_30 |
98.678 |
0.0 |
vcrV |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vcrV) type III secretion system needle tip protein VcrV [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_31 |
100.0 |
1.08E-64 |
vcrG |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vcrG) type III secretion system chaperone VcrG [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_32 |
97.81 |
3.05E-100 |
vcrR |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vcrR) type III secretion system protein VcrR [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_33 |
99.858 |
0.0 |
vcrD |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vcrD) type III secretion system C ring protein VcrD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_34 |
100.0 |
3.8E-81 |
vscY |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscY) type III secretion system C-ring protein VscY for secretion specificity [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_35 |
100.0 |
4.84E-91 |
vscX |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscX) type III secretion system C-ring protein VscX for secretion specificity [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_36 |
97.561 |
1.68E-86 |
sycN/vcr2 |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(sycN/vcr2) type III secretion system regulatory protein [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_37 |
100.0 |
1.05E-62 |
tyeA/vcr1 |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(tyeA/vcr1) type III secretion system regulatory protein [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_38 |
99.327 |
0.0 |
vopN |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vopN) type III secretion system protein VopN [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_39 |
99.091 |
0.0 |
vscN |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscN) type III secretion system ATPase VscN [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_40 |
100.0 |
1.32E-100 |
vscO |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscO) type III secretion system protein YscO [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_41 |
94.843 |
0.0 |
vscP |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscP) type III secretion system needle length control protein VscP [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_42 |
99.377 |
0.0 |
vscQ |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscQ) type III secretion system cytoplasmic protein VscQ [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_43 |
100.0 |
3.02E-156 |
vscR |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscR) type III secretion system C-ring protein VscR [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_44 |
100.0 |
5.62E-57 |
vscS |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscS) type III secretion system C-ring protein VscS [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_45 |
100.0 |
0.0 |
vscT |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscT) type III secretion system C ring protein VscT [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_46 |
99.715 |
0.0 |
vscU |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscU) type III secretion system C-ring protein VscU [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_51 |
98.78 |
0.0 |
vopQ |
VF0632 |
T3SS1 secreted effectors |
Effector delivery system |
VFC0086 |
|
(vopQ) type III secretion system effector VopQ [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio cholerae |
| LBHG01000011.1_52 |
98.684 |
1.24E-110 |
vecA |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vecA) Type III secretion system chaperone VecA [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_53 |
99.077 |
0.0 |
vopR |
VF0632 |
T3SS1 secreted effectors |
Effector delivery system |
VFC0086 |
|
(vopR) Type III secretion system effector VopR, phosphoinositide-binding protein [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio cholerae |
| LBHG01000011.1_55 |
99.225 |
0.0 |
vopS |
VF0632 |
T3SS1 secreted effectors |
Effector delivery system |
VFC0086 |
|
(vopS) type III secretion system effector VopS, Adenylyltransferase [T3SS1 secreted effectors (VF0632) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio cholerae |
| LBHG01000011.1_57 |
100.0 |
1.3E-156 |
vscL |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscL) type III secretion system cytoplasmic protein VscL [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_58 |
100.0 |
6.77E-166 |
vscK |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscK) type III secretion system cytoplasmic protein VscK [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_59 |
99.194 |
0.0 |
vscJ |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscJ) type III secretion system IM ring protein VscJ [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_60 |
100.0 |
1.97E-80 |
vscI |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscI) type III secretion system inner rod protein VscI [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_61 |
97.115 |
7.55E-152 |
vscH |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscH) type III secretion system protein VscH [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_62 |
100.0 |
2.03E-84 |
vscG |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscG) Type III secretion system chaperone VscG [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_63 |
100.0 |
9.84E-56 |
vscF |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscF) type III secretion system needle protein VscF [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_65 |
99.538 |
0.0 |
vscD |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscD) type III secretion system IM ring protein VscD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_66 |
99.204 |
0.0 |
vscC |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscC) type III secretion system OM ring protein VscC [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_67 |
97.887 |
1.79E-104 |
vscB |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vscB) type III secretion system regulatory protein, YscB homolog [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_68 |
99.693 |
0.0 |
exsD |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(exsD) transcriptional regulator ExsD [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_69 |
99.65 |
0.0 |
exsA |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(exsA) transcriptional regulator ExsA [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_70 |
99.275 |
2.98E-99 |
virG |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(virG) Type III secretion system chaperone VscW [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000011.1_71 |
100.0 |
5.2E-108 |
vxsC |
VF0408 |
T3SS1 |
Effector delivery system |
VFC0086 |
Chromosome I encoded; similar to the Ysc secretion system in Yersinia; T3SS1 genes are positively regulated by VP1699 and negatively regulated by VP1698 |
(vxsC) transcriptional regulator ExsC [T3SS1 (VF0408) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000012.1_1 |
77.477 |
8.79E-59 |
tufA |
VF0460 |
EF-Tu |
Adherence |
VFC0001 |
|
(tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] |
Francisella tularensis |
| LBHG01000012.1_22 |
66.337 |
7.45E-101 |
vfr |
VF0082 |
Type IV pili |
Adherence |
VFC0001 |
PilA, B, C, D, E, F, M, N, O, P, Q, T, U, V, W, X, Y1, Y2, Z, and fimT, U, V are involved in the biogenesis and mechanical function of pili, pilG, H, I, K, chpA, B, C, D, E, pilS, R, fimS, rpoN, algR, algU, and vfr are involved in transcriptional regulation and chemosensory pathways that control the expression or activity of the twitching motility of the pili |
(vfr) cAMP-regulatory protein [Type IV pili (VF0082) - Adherence (VFC0001)] [Pseudomonas aeruginosa PAO1] |
Pseudomonas aeruginosa |
| LBHG01000012.1_37 |
85.308 |
1.08E-134 |
motX |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(motX) sodium-type flagellar protein MotX [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000012.1_75 |
74.811 |
0.0 |
htpB |
VF0159 |
Hsp60 |
Adherence |
VFC0001 |
|
(htpB) Hsp60, 60K heat shock protein HtpB [Hsp60 (VF0159) - Adherence (VFC0001)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
Legionella pneumophila |
| LBHG01000013.1_70 |
71.499 |
0.0 |
mshG |
VF0515 |
MSHA pili |
Adherence |
VFC0001 |
|
(mshG) MSHA biogenesis protein MshG [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000013.1_71 |
77.583 |
0.0 |
mshE |
VF0515 |
MSHA pili |
Adherence |
VFC0001 |
|
(mshE) MSHA biogenesis protein MshE [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000013.1_73 |
61.922 |
2.09E-130 |
mshM |
VF0515 |
MSHA pili |
Adherence |
VFC0001 |
|
(mshM) MSHA biogenesis protein MshM [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000013.1_74 |
68.271 |
0.0 |
mshL |
VF0515 |
MSHA pili |
Adherence |
VFC0001 |
|
(mshL) MSHA biogenesis protein MshL [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000013.1_78 |
61.997 |
0.0 |
mshH |
VF0515 |
MSHA pili |
Adherence |
VFC0001 |
|
(mshH) MSHA biogenesis protein MshH [MSHA pili (VF0515) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000014.1_17 |
74.481 |
0.0 |
tapT |
VF0475 |
Tap type IV pili |
Adherence |
VFC0001 |
Polar; similar to the P. aeruginosa Pil system; constitutively expressed |
(tapT) twitching ATPase [Tap type IV pili (VF0475) - Adherence (VFC0001)] [Aeromonas hydrophila ML09-119] |
Aeromonas hydrophila |
| LBHG01000014.1_51 |
64.398 |
3.13E-91 |
algU |
VF0091 |
Alginate |
Biofilm |
VFC0271 |
Alginate production is frequently referred to as mucoidy because colonies producing alginate have a wet glistening (mucoid) appearance, which is very different from that of colonies not producing alginate; most of the alginate biosynthetic genes are clustered in the algD operon; Alginate production is highly regulated. Regulatory genes are located in two areas far removed from the biosynthetic genes, with one exception algC |
(algU) alginate biosynthesis protein AlgZ/FimS [Alginate (VF0091) - Biofilm (VFC0271)] [Pseudomonas aeruginosa PAO1] |
Pseudomonas aeruginosa |
| LBHG01000014.1_75 |
75.949 |
9.28E-171 |
rpoS |
VF0112 |
RpoS |
Regulation |
VFC0301 |
|
(rpoS) RNA polymerase sigma factor RpoS [RpoS (VF0112) - Regulation (VFC0301)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
Salmonella enterica (serovar typhimurium) |
| LBHG01000014.1_82 |
76.271 |
2.22E-30 |
csrA |
VF0261 |
CsrA |
Regulation |
VFC0301 |
Belongs to a highly conserved family of global regulators that typically control stationary phase traits post-transcriptionally |
(csrA) carbon storage regulator CsrA [CsrA (VF0261) - Regulation (VFC0301)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
Legionella pneumophila |
| LBHG01000015.1_28 |
76.487 |
0.0 |
katB |
VF0168 |
KatAB |
Stress survival |
VFC0282 |
|
(katB) catalase-peroxidase KatB [KatAB (VF0168) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
Legionella pneumophila |
| LBHG01000015.1_66 |
65.246 |
1.89E-142 |
VV1_RS15615 |
VF0612 |
Flp pili |
Adherence |
VFC0001 |
Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. |
(VV1_RS15615) type II secretion system F family protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] |
Vibrio vulnificus |
| LBHG01000015.1_67 |
86.461 |
0.0 |
VV1_RS15610 |
VF0612 |
Flp pili |
Adherence |
VFC0001 |
Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. |
(VV1_RS15610) CpaF family protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] |
Vibrio vulnificus |
| LBHG01000015.1_70 |
71.719 |
0.0 |
VV1_RS15595 |
VF0612 |
Flp pili |
Adherence |
VFC0001 |
Flp pili are polymers of the mature Flp pilin protein, and they are assembled and secreted by a complex of proteins encoded by the tad operon. |
(VV1_RS15595) pilus assembly protein N-terminal domain-containing protein [Flp pili (VF0612) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] |
Vibrio vulnificus |
| LBHG01000154.1_1 |
97.059 |
2.23E-44 |
tdh |
VF0517 |
TDH |
Exotoxin |
VFC0235 |
|
(tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000176.1_1 |
96.875 |
7.21E-93 |
tdh |
VF0517 |
TDH |
Exotoxin |
VFC0235 |
|
(tdh) thermostable direct hemolysin A [TDH (VF0517) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000018.1_21 |
64.865 |
2.93E-100 |
rpe |
VF0543 |
Capsule |
Immune modulation |
VFC0258 |
Group 4 capsule; high molecular weight (HMW) O-antigen capsule |
(rpe) ribulose-phosphate 3-epimerase [Capsule (VF0543) - Immune modulation (VFC0258)] [Francisella tularensis subsp. tularensis SCHU S4] |
Francisella tularensis |
| LBHG01000018.1_52 |
96.0 |
3.21E-10 |
tufA |
VF0460 |
EF-Tu |
Adherence |
VFC0001 |
|
(tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] |
Francisella tularensis |
| LBHG01000019.1_13 |
80.071 |
4.89E-174 |
kdsA |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(kdsA) 2-dehydro-3-deoxyphosphooctonate aldolase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000019.1_31 |
73.867 |
0.0 |
flgT |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgT) Vibrio-specific flagellar H-ring component FlgT [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_32 |
85.849 |
2.38E-141 |
flgO |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgO) Vibrio-specific flagellar H-ring component FlgO [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_33 |
83.077 |
4.91E-75 |
flgP |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgP) Vibrio-specific flagellar H-ring component FlgP [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_34 |
69.504 |
1.15E-70 |
flgN |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgN) flagellar biosynthesis chaperone FlgN [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_35 |
63.208 |
2.88E-42 |
flgM |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgM) negative regulator of flagellin synthesis FlgM, putative [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_37 |
86.688 |
0.0 |
cheV |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(cheV) chemotaxis protein CheV [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_38 |
93.091 |
0.0 |
cheR |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(cheR) chemotaxis protein methyltransferase CheR [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_39 |
82.443 |
9.8E-83 |
flgB |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgB) flagellar basal body rod protein FlgB [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_40 |
89.13 |
1.75E-86 |
flgC |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgC) flagellar basal body rod protein FlgC [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_41 |
84.681 |
1.2E-145 |
flgD |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgD) flagellar basal-body rod modification protein FlgD [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_42 |
81.693 |
0.0 |
flgE |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgE) flagellar hook protein FlgE [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_43 |
81.526 |
2.45E-154 |
flgF |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgF) flagellar basal-body rod protein FlgF [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_44 |
85.878 |
5.42E-173 |
flgG |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgG) flagellar basal-body rod protein FlgG [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_45 |
74.793 |
8.89E-133 |
flgH |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgH) flagellar L-ring protein precursor FlgH [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_46 |
87.393 |
0.0 |
flgI |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgI) flagellar P-ring protein precursor FlgI [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_47 |
62.857 |
3.72E-137 |
flgJ |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgJ) peptidoglycan hydrolase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_48 |
67.647 |
0.0 |
flgK |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgK) flagellar hook-associated protein 1 FlgK [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_49 |
69.521 |
0.0 |
flgL |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flgL) flagellar hook-associated protein 3 FlgL [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000019.1_50 |
76.623 |
0.0 |
flaA |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flaA) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000002.1_96 |
99.76 |
0.0 |
tlh |
VF0610 |
TLH |
Exotoxin |
VFC0235 |
High-conserved and widely distributed among Vibrio species; a full-protein of 418 amino acids (MW~47.3 kDa), and a post-transductional modification removes the N-terminal signal peptide, leaving a mature protein of 399 amino acids |
(tlh) thermolabile hemolysin TLH [TLH (VF0610) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000002.1_137 |
69.349 |
7.48E-131 |
lfgG |
VF0474 |
Lateral flagella |
Motility |
VFC0204 |
|
(lfgG) lateral flagellar basal-body rod protein LfgG [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] |
Aeromonas salmonicida |
| LBHG01000002.1_138 |
60.748 |
1.2E-88 |
lfgH |
VF0474 |
Lateral flagella |
Motility |
VFC0204 |
|
(lfgH) lateral flagellar L-ring protein, LfgH [Lateral flagella (VF0474) - Motility (VFC0204)] [Aeromonas salmonicida subsp. salmonicida A449] |
Aeromonas salmonicida |
| LBHG01000002.1_156 |
72.467 |
0.0 |
htpB |
VF0159 |
Hsp60 |
Adherence |
VFC0001 |
|
(htpB) Hsp60, 60K heat shock protein HtpB [Hsp60 (VF0159) - Adherence (VFC0001)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
Legionella pneumophila |
| LBHG01000021.1_1 |
96.0 |
3.21E-10 |
tufA |
VF0460 |
EF-Tu |
Adherence |
VFC0001 |
|
(tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] |
Francisella tularensis |
| LBHG01000022.1_11 |
77.922 |
1.71E-39 |
vscS2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscS2) type III secretion system protein VscS2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_14 |
89.762 |
0.0 |
vscN2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscN2) type III secretion system ATPase VscN2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_15 |
78.099 |
0.0 |
vscC2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscC2) type III secretion system protein VscC2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_17 |
67.841 |
3.45E-113 |
vscT2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscT2) type III secretion system C-ring protein VscT2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_18 |
78.947 |
9.74E-113 |
vscR2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscR2) type III secretion system C-ring protein VscR2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_20 |
67.76 |
2.12E-87 |
VP_RS21620 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(VP_RS21620) winged helix-turn-helix domain-containing protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_21 |
67.143 |
3.85E-32 |
vscQ2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscQ2) type III secretion protein VscQ2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_22 |
66.507 |
6.41E-96 |
VP_RS21630 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(VP_RS21630) putative type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_26 |
75.362 |
0.0 |
vscU2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscU2) type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000022.1_27 |
75.598 |
0.0 |
vcrD2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vcrD2) type III secretion system protein [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000219.1_1 |
81.818 |
4.38E-72 |
ugd |
VF0560 |
Capsule |
Immune modulation |
VFC0258 |
The Klebsiella polysaccharide capsule is produced through a Wzy-dependent process, for which the synthesis and export machinery are encoded in a single 10-30 kb region of the genome known as the K locus.; 78 distinct capsule phenotypes have been recognized by serological typing, but many isolates are serologically non-typable.; capsular serotypes vary substantially in the degree of serum resistance; K1, K2 and K5 are highly serum resistant and are associated with hypervirulent strains that differ from classical K. pneumoniae in that they commonly cause community-acquired disease. |
(ugd) UDP-glucose 6-dehydrogenase [Capsule (VF0560) - Immune modulation (VFC0258)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] |
Klebsiella pneumoniae |
| LBHG01000023.1_9 |
65.816 |
2.77E-93 |
ureG |
VF0050 |
Urease |
Stress survival |
VFC0282 |
|
(ureG) urease accessory protein (ureG) [Urease (VF0050) - Stress survival (VFC0282)] [Helicobacter pylori 26695] |
Helicobacter pylori |
| LBHG01000023.1_12 |
60.457 |
0.0 |
ureB |
VF0050 |
Urease |
Stress survival |
VFC0282 |
|
(ureB) urease beta subunit UreB, urea amidohydrolase [Urease (VF0050) - Stress survival (VFC0282)] [Helicobacter pylori 26695] |
Helicobacter pylori |
| LBHG01000023.1_22 |
85.106 |
1.07E-120 |
trhX |
VF0518 |
TRH |
Exotoxin |
VFC0235 |
TRH is a heat labile toxin and immunologically similar to TDH, trh and tdh share approximately 70% homology |
(trhX) TDH-related hemolysin [TRH (VF0518) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus] |
Vibrio parahaemolyticus |
| LBHG01000025.1_2 |
82.128 |
2.46E-137 |
hlyD |
VF0225 |
Alpha-Hemolysin |
Exotoxin |
VFC0235 |
Best-characterized RTX protein secreted by a type I secretion system: the structural gene encoding the hemolysin (hlyA) is part of an operon that also encodes a dedicated export system (HlyB and HlyD comprising a type I secretion system) and a toxin modifying enzyme (HlyC). The HlyC protein is responsible for acylation of HlyA, resulting in toxin activation; The hly operon is found on a plasmid of EHEC O157:H7, while the hly operon is often located adjacent to the P fimbrial genes on the same pathogenicity island on the chromosome of UPEC strains |
(hlyD) Hemolysin D [Alpha-Hemolysin (VF0225) - Exotoxin (VFC0235)] [Escherichia coli CFT073] |
Escherichia coli (UPEC) |
| LBHG01000025.1_23 |
74.468 |
0.0 |
flaE |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flaE) secreted flagellin involved in biofilm formation [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000265.1_1 |
100.0 |
1.84E-71 |
trhX |
VF0518 |
TRH |
Exotoxin |
VFC0235 |
TRH is a heat labile toxin and immunologically similar to TDH, trh and tdh share approximately 70% homology |
(trhX) TDH-related hemolysin [TRH (VF0518) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus] |
Vibrio parahaemolyticus |
| LBHG01000003.1_93 |
74.342 |
2.1E-173 |
lpxC |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(lpxC) UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000003.1_130 |
65.021 |
0.0 |
rfaE |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(rfaE) ADP-heptose synthase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000003.1_289 |
76.031 |
0.0 |
ugd |
VF0560 |
Capsule |
Immune modulation |
VFC0258 |
The Klebsiella polysaccharide capsule is produced through a Wzy-dependent process, for which the synthesis and export machinery are encoded in a single 10-30 kb region of the genome known as the K locus.; 78 distinct capsule phenotypes have been recognized by serological typing, but many isolates are serologically non-typable.; capsular serotypes vary substantially in the degree of serum resistance; K1, K2 and K5 are highly serum resistant and are associated with hypervirulent strains that differ from classical K. pneumoniae in that they commonly cause community-acquired disease. |
(ugd) UDP-glucose 6-dehydrogenase [Capsule (VF0560) - Immune modulation (VFC0258)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] |
Klebsiella pneumoniae |
| LBHG01000003.1_301 |
62.042 |
0.0 |
tviB |
VF0465 |
Capsule |
Immune modulation |
VFC0258 |
A. baumannii pan-genome was shown to include a highly diverse repertoire of gene sequences. In particular, capsule gene cluster is highly variable. The cluster at the K locus often contains either capsule export genes (wza, wzb, and wzc) or genes for simple sugar synthesis (galU, ugd, gpi, gne1, and pgm), which flank a central variable region that would be required for the synthesis of a specific monosaccharide. |
(tviB) Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB [Capsule (VF0465) - Immune modulation (VFC0258)] [Acinetobacter baumannii ACICU] |
Acinetobacter baumannii |
| LBHG01000003.1_319 |
74.121 |
9.49E-173 |
rfaD |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(rfaD) ADP-L-glycero-D-mannoheptose-6-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000003.1_334 |
68.151 |
4.64E-148 |
wbtL |
VF0542 |
LPS |
Immune modulation |
VFC0258 |
The structure of Francisella spp. lipid A is unique in that it is modified by various carbohydrates that greatly reduce TLR4 activation and allow for immune evasion |
(wbtL) glucose-1-phosphate thymidylyltransferase [LPS (VF0542) - Immune modulation (VFC0258)] [Francisella tularensis subsp. tularensis SCHU S4] |
Francisella tularensis |
| LBHG01000003.1_335 |
64.865 |
7.28E-169 |
rffG |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(rffG) dTDP-glucose 46-dehydratase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000003.1_339 |
63.095 |
6.25E-115 |
lgtF |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(lgtF) beta-1,4-glucosyltransferase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000003.1_406 |
66.071 |
1.22E-156 |
epsK |
VF0613 |
Eps T2SS |
Effector delivery system |
VFC0086 |
|
(epsK) type II secretion system minor pseudopilin GspK [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] |
Vibrio cholerae |
| LBHG01000003.1_407 |
62.78 |
1.9E-101 |
epsJ |
VF0613 |
Eps T2SS |
Effector delivery system |
VFC0086 |
|
(epsJ) type II secretion system minor pseudopilin GspJ [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] |
Vibrio cholerae |
| LBHG01000003.1_408 |
80.357 |
5.12E-62 |
epsI |
VF0613 |
Eps T2SS |
Effector delivery system |
VFC0086 |
|
(epsI) type II secretion system minor pseudopilin GspI [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] |
Vibrio cholerae |
| LBHG01000003.1_410 |
90.278 |
2.03E-95 |
epsG |
VF0613 |
Eps T2SS |
Effector delivery system |
VFC0086 |
|
(epsG) type II secretion system major pseudopilin GspG [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] |
Vibrio cholerae |
| LBHG01000003.1_411 |
79.259 |
0.0 |
epsF |
VF0613 |
Eps T2SS |
Effector delivery system |
VFC0086 |
|
(epsF) type II secretion system inner membrane protein GspF [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] |
Vibrio cholerae |
| LBHG01000003.1_412 |
84.114 |
0.0 |
epsE |
VF0613 |
Eps T2SS |
Effector delivery system |
VFC0086 |
|
(epsE) type II secretion system ATPase GspE [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] |
Vibrio cholerae |
| LBHG01000003.1_413 |
82.318 |
0.0 |
epsD |
VF0613 |
Eps T2SS |
Effector delivery system |
VFC0086 |
|
(epsD) type II secretion system secretin GspD [Eps T2SS (VF0613) - Effector delivery system (VFC0086)] [Vibrio cholerae O395] |
Vibrio cholerae |
| LBHG01000033.1_1 |
77.477 |
8.79E-59 |
tufA |
VF0460 |
EF-Tu |
Adherence |
VFC0001 |
|
(tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] |
Francisella tularensis |
| LBHG01000004.1_38 |
62.326 |
0.0 |
msbA |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(msbA) lipid transporter ATP-binding/permease [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000004.1_41 |
69.96 |
1.25E-126 |
nueA |
VF0473 |
Polar flagella |
Motility |
VFC0204 |
Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments |
(nueA) NeuA protein [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] |
Aeromonas hydrophila |
| LBHG01000004.1_124 |
63.922 |
0.0 |
acrB |
VF0568 |
AcrAB |
Antimicrobial activity/Competitive advantage |
VFC0325 |
|
(acrB) acriflavine resistance protein B [AcrAB (VF0568) - Antimicrobial activity/Competitive advantage (VFC0325)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] |
Klebsiella pneumoniae |
| LBHG01000005.1_1 |
82.713 |
0.0 |
flaB |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flaB) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_3 |
64.732 |
0.0 |
fliD |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliD) flagellar hook-associated protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_5 |
86.765 |
9.18E-88 |
fliS |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliS) flagellar protein FliS [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_7 |
78.893 |
0.0 |
flrA |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flrA) sigma-54 dependent transcriptional activator [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_8 |
84.29 |
0.0 |
fleS/flrB |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fleS/flrB) sensory box sensor histidine kinase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_9 |
83.824 |
0.0 |
fleR/flrC |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fleR/flrC) sigma-54 dependent response regulator [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_10 |
75.728 |
1.15E-55 |
fliE |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliE) flagellar hook-basal body protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_11 |
81.443 |
0.0 |
fliF |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliF) flagellar M-ring protein FliF [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_12 |
86.994 |
0.0 |
fliG |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliG) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_13 |
69.925 |
3.86E-141 |
fliH |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliH) flagellar assembly protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_14 |
91.304 |
0.0 |
fliI |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliI) flagellum-specific ATP synthase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_15 |
69.231 |
2.95E-73 |
fliJ |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliJ) flagellar protein FliJ [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_17 |
75.595 |
1.06E-88 |
fliL |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliL) flagellar basal body-associated protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_18 |
87.536 |
0.0 |
fliM |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliM) flagellar motor switch protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_19 |
88.971 |
2.05E-85 |
fliN |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliN) flagellar motor switch protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_20 |
65.766 |
1.19E-41 |
fliO |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliO) flagellar protein FliO [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_21 |
79.636 |
5.81E-150 |
fliP |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliP) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_22 |
84.27 |
3.09E-53 |
fliQ |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliQ) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_23 |
78.462 |
7.77E-157 |
fliR |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliR) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_24 |
82.447 |
0.0 |
flhB |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flhB) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_25 |
90.415 |
0.0 |
flhA |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flhA) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_26 |
74.9 |
0.0 |
flhF |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flhF) flagellar biosynthesis protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_27 |
91.864 |
0.0 |
fleN/flhG |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fleN/flhG) MinD-like ATPase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_28 |
82.377 |
3.73E-154 |
fliA |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(fliA) flagellar biosynthesis sigma factor FliA [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_29 |
97.541 |
3.12E-85 |
cheY |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(cheY) chemotaxis protein CheY [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_30 |
69.106 |
4.83E-120 |
cheZ |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(cheZ) chemotaxis protein CheZ [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_31 |
72.739 |
0.0 |
cheA |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(cheA) chemotaxis protein CheA [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_32 |
83.82 |
0.0 |
cheB |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(cheB) chemotaxis-specific methylesterase [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_33 |
62.302 |
4.57E-121 |
AHML_RS07540 |
VF0473 |
Polar flagella |
Motility |
VFC0204 |
Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments |
(AHML_RS07540) CobQ/CobB/MinD/ParA family protein [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] |
Aeromonas hydrophila |
| LBHG01000005.1_35 |
92.683 |
4.69E-111 |
cheW |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(cheW) purine-binding chemotaxis protein CheW [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_124 |
66.146 |
2.5E-98 |
sodB |
VF0169 |
SodB |
Stress survival |
VFC0282 |
|
(sodB) superoxide dismutase [SodB (VF0169) - Stress survival (VFC0282)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
Legionella pneumophila |
| LBHG01000005.1_129 |
78.983 |
2.42E-177 |
motY |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(motY) sodium-type flagellar protein MotY [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000005.1_185 |
77.049 |
8.19E-138 |
flmH |
VF0473 |
Polar flagella |
Motility |
VFC0204 |
Types of bacterial movement: swimming, swarming, gliding, twitching and sliding. Only swimming and swarming are correlated with the presence of flagella. Swimming is an individual endeavour, while swarming is the movement of a group of bacteria; constitutively expressed for motility in liquid environments |
(flmH) short chain dehydrogenase/reductase family oxidoreductase [Polar flagella (VF0473) - Motility (VFC0204)] [Aeromonas hydrophila ML09-119] |
Aeromonas hydrophila |
| LBHG01000005.1_186 |
63.636 |
5.92E-29 |
acpXL |
VF0367 |
LPS |
Immune modulation |
VFC0258 |
Brucella possesses a non-classical LPS as compared with the so-called classical LPS from enterobacteria such as Escherichia coli. B. abortus lipid A possesses a diaminoglucose backbone (rather than glucosamine), and acyl groups are longer (C28 rather than C12 and C16) and are only linked to the core by amide bounds (rather than ester and amide bonds).; In contrast to enterobacterial LPSs, Brucella LPS is several-hundred-times less active and toxic than E. coli LPS.; this is an evolutionary adaptation to an intracellular lifestyle, low endotoxic activity is shared by other intracellular pathogens such as Bartonella and Legionella. |
(acpXL) acyl carrier protein [LPS (VF0367) - Immune modulation (VFC0258)] [Brucella melitensis bv. 1 str. 16M] |
Brucella melitensis |
| LBHG01000052.1_1 |
84.127 |
0.0 |
flaD |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(flaD) flagellin [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000006.1_6 |
72.35 |
1.56E-114 |
vopD2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vopD2) type III secretion system translocator protein VopD2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000006.1_7 |
73.352 |
7.6E-180 |
vopB2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vopB2) type III secretion system translocator protein VopB2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000006.1_12 |
70.988 |
2.85E-80 |
vscJ2 |
VF0409 |
T3SS2 |
Effector delivery system |
VFC0086 |
Chromosome II encoded; similar to the Inv-Mxi-Spa secretion system in Salmonella and Shigella |
(vscJ2) type III secretion system protein VscJ2 [T3SS2 (VF0409) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000006.1_16 |
64.576 |
5.06E-130 |
vopA/vopP |
VF0633 |
T3SS2 secreted effectors |
Effector delivery system |
VFC0086 |
|
(vopA/vopP) type III secretion system effector VopA, acetyltransferase [T3SS2 secreted effectors (VF0633) - Effector delivery system (VFC0086)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio cholerae |
| LBHG01000006.1_37 |
80.0 |
6.06E-114 |
gmhA/lpcA |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(gmhA/lpcA) phosphoheptose isomerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000006.1_60 |
62.537 |
2.88E-151 |
lpxD |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(lpxD) UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000006.1_151 |
61.012 |
3.42E-155 |
galE |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(galE) UDP-glucose 4-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000006.1_217 |
75.504 |
1.63E-165 |
ompU |
VF0514 |
OmpU |
Adherence |
VFC0001 |
Conserved major outer membrane porin, widely present in pathogenic vibrio |
(ompU) outer membrane protein OmpU [OmpU (VF0514) - Adherence (VFC0001)] [Vibrio vulnificus CMCP6] |
Vibrio vulnificus |
| LBHG01000006.1_272 |
73.665 |
0.0 |
pilB |
VF0609 |
ChiRP |
Adherence |
VFC0001 |
Also known as PilA pilus |
(pilB) type IV-A pilus assembly ATPase PilB [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio vulnificus |
| LBHG01000006.1_273 |
74.321 |
0.0 |
pilC |
VF0609 |
ChiRP |
Adherence |
VFC0001 |
Also known as PilA pilus |
(pilC) type II secretion system F family protein [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio vulnificus |
| LBHG01000006.1_274 |
73.611 |
3.62E-157 |
pilD/vcpD |
VF0609 |
ChiRP |
Adherence |
VFC0001 |
Also known as PilA pilus |
(pilD/vcpD) A24 family peptidase [ChiRP (VF0609) - Adherence (VFC0001)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio vulnificus |
| LBHG01000006.1_285 |
88.889 |
3.2E-118 |
luxS |
VF0406 |
AI-2 |
Biofilm |
VFC0271 |
AI-2 is produced and detected by a wide variety of bacteria and is presumed to facilitate interspecies communications. |
(luxS) S-ribosylhomocysteinase [AI-2 (VF0406) - Biofilm (VFC0271)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000063.1_1 |
79.114 |
9.43E-178 |
tufA |
VF0460 |
EF-Tu |
Adherence |
VFC0001 |
|
(tufA) elongation factor Tu [EF-Tu (VF0460) - Adherence (VFC0001)] [Francisella tularensis subsp. tularensis SCHU S4] |
Francisella tularensis |
| LBHG01000007.1_30 |
98.567 |
0.0 |
vpadF |
VF0578 |
VpadF |
Adherence |
VFC0001 |
|
(vpadF) surface adhesin VpadF [VpadF (VF0578) - Adherence (VFC0001)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000007.1_193 |
99.773 |
0.0 |
mam7 |
VF0512 |
MAM7 |
Adherence |
VFC0001 |
MAM7 is conserved in many Gram-negative bacteria, contains a transmembrane motif at the N terminus and seven mammalian cell entry (mce) domains that are also found in Mycobacterium spp. and some Gram positive bacteria species |
(mam7) multivalent adhesion molecule MAM7 [MAM7 (VF0512) - Adherence (VFC0001)] [Vibrio parahaemolyticus RIMD 2210633] |
Vibrio parahaemolyticus |
| LBHG01000069.1_2 |
73.661 |
2.68E-126 |
ugd |
VF0560 |
Capsule |
Immune modulation |
VFC0258 |
The Klebsiella polysaccharide capsule is produced through a Wzy-dependent process, for which the synthesis and export machinery are encoded in a single 10-30 kb region of the genome known as the K locus.; 78 distinct capsule phenotypes have been recognized by serological typing, but many isolates are serologically non-typable.; capsular serotypes vary substantially in the degree of serum resistance; K1, K2 and K5 are highly serum resistant and are associated with hypervirulent strains that differ from classical K. pneumoniae in that they commonly cause community-acquired disease. |
(ugd) UDP-glucose 6-dehydrogenase [Capsule (VF0560) - Immune modulation (VFC0258)] [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] |
Klebsiella pneumoniae |
| LBHG01000075.1_1 |
100.0 |
8.23E-66 |
trhX |
VF0518 |
TRH |
Exotoxin |
VFC0235 |
TRH is a heat labile toxin and immunologically similar to TDH, trh and tdh share approximately 70% homology |
(trhX) TDH-related hemolysin [TRH (VF0518) - Exotoxin (VFC0235)] [Vibrio parahaemolyticus] |
Vibrio parahaemolyticus |
| LBHG01000008.1_84 |
62.13 |
9.93E-155 |
galE |
VF0044 |
LOS |
Immune modulation |
VFC0258 |
Lic1A (phosphorylcholine (ChoP) kinase) 5'-CAAT-3' within the 5'-end of its coding sequence; lic2A, also referred to as lexA, variation in the number of 5'-CAAT-3' repeats has been shown to correlate directly with phase variation of the Gal-alpha(1-4)beta-Gal LPS structure; But lgtC (glycosyltransferase), another phase-variable gene, ultimately dictates whether this structure is synthesized. lic3A encode a sialyl transferase which directs the substitution of LPS with sialic acid. |
(galE) UDP-glucose 4-epimerase [LOS (VF0044) - Immune modulation (VFC0258)] [Haemophilus influenzae Rd KW20] |
Haemophilus influenzae |
| LBHG01000009.1_31 |
84.758 |
1.76E-161 |
IlpA |
VF0513 |
IlpA |
Adherence |
VFC0001 |
|
(IlpA) immunogenic lipoprotein A [IlpA (VF0513) - Adherence (VFC0001)] [Vibrio vulnificus YJ016] |
Vibrio vulnificus |
| LBHG01000009.1_45 |
82.484 |
0.0 |
motB |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(motB) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000009.1_46 |
90.119 |
5.17E-158 |
motA |
VF0519 |
Flagella |
Motility |
VFC0204 |
Single polar flagellum |
(motA) flagellar motor protein [Flagella (VF0519) - Motility (VFC0204)] [Vibrio cholerae O1 biovar El Tor str. N16961] |
Vibrio cholerae |
| LBHG01000009.1_149 |
60.89 |
0.0 |
icl |
VF0253 |
Isocitrate lyase |
Others |
VFC0346 |
|
(icl) Isocitrate lyase Icl (isocitrase) (isocitratase) [Isocitrate lyase (VF0253) - Others (VFC0346)] [Mycobacterium tuberculosis H37Rv] |
Mycobacterium tuberculosis |