The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29864:G->A |
2697049 |
NC_045512.2 |
29864 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
China,
Italy,
Malaysia,
Chile,
Spain,
Russia,
查看全部
|
0.0385‰ |
886
|
NC_045512.2:29864:G->C |
2697049 |
NC_045512.2 |
29864 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
Malaysia,
Chile,
Costa Rica,
查看全部
|
0.006‰ |
138
|
NC_045512.2:29864:G->T |
2697049 |
NC_045512.2 |
29864 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Greece,United States |
0.0017‰ |
40
|
NC_045512.2:29864:GAATGACAAAAAAAAAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29864 |
GAATGACAAAAAAAAAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0‰ |
1
|
NC_045512.2:29864:G->GTCCACGCCAGCGAGCCGGGCTTCTT |
2697049 |
NC_045512.2 |
29864 |
G |
GTCCACGCCAGCGAGCCGGGCTTCTT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Slovenia |
0‰ |
1
|
NC_045512.2:29863:A->GACTGTTTGCGCGTACGCGTTCC |
2697049 |
NC_045512.2 |
29863 |
A |
GACTGTTTGCGCGTACGCGTTCC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Slovenia |
0‰ |
1
|
NC_045512.2:29863:A->AT |
2697049 |
NC_045512.2 |
29863 |
A |
AT |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
NC_045512.2:29863:AGAAT->A |
2697049 |
NC_045512.2 |
29863 |
AGAAT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0001‰ |
3
|
NC_045512.2:29863:A->AC |
2697049 |
NC_045512.2 |
29863 |
A |
AC |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29863:AG->A |
2697049 |
NC_045512.2 |
29863 |
AG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0003‰ |
9
|
NC_045512.2:29863:A->G |
2697049 |
NC_045512.2 |
29863 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,United States,Russia |
0.0061‰ |
142
|
NC_045512.2:29863:A->C |
2697049 |
NC_045512.2 |
29863 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,China,Chile |
0.0021‰ |
49
|
NC_045512.2:29863:A->T |
2697049 |
NC_045512.2 |
29863 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Belgium,
China,
Chile,
Spain,
查看全部
|
0.0023‰ |
55
|
NC_045512.2:29862:GAGAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAA |
G |
indel |
downstream |
|
|
|
|
Human |
Belgium |
0.0001‰ |
3
|
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Human |
Brazil |
0‰ |
1
|
NC_045512.2:29862:G->AGTCCTCCCTAATGTTAC |
2697049 |
NC_045512.2 |
29862 |
G |
AGTCCTCCCTAATGTTAC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0‰ |
1
|
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0‰ |
2
|
NC_045512.2:29862:GAGAATGAC->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGAC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Belgium |
0‰ |
1
|
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0.0001‰ |
3
|