The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0‰ |
1
|
NC_045512.2:29862:GA->G |
2697049 |
NC_045512.2 |
29862 |
GA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0.0002‰ |
6
|
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0011‰ |
27
|
NC_045512.2:29862:G->ATT |
2697049 |
NC_045512.2 |
29862 |
G |
ATT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0‰ |
1
|
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29862:G->GCTGTCTCTTATAC |
2697049 |
NC_045512.2 |
29862 |
G |
GCTGTCTCTTATAC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29862:G->GT |
2697049 |
NC_045512.2 |
29862 |
G |
GT |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0‰ |
1
|
NC_045512.2:29862:G->C |
2697049 |
NC_045512.2 |
29862 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,China |
0.0059‰ |
137
|
NC_045512.2:29862:G->A |
2697049 |
NC_045512.2 |
29862 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,
Belgium,
United States,
United Kingdom,
Malaysia,
Chile,
Russia,
Costa Rica,
查看全部
|
0.0309‰ |
712
|
NC_045512.2:29862:G->T |
2697049 |
NC_045512.2 |
29862 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,
Malaysia,
Spain,
Costa Rica,
查看全部
|
0.0064‰ |
148
|
NC_045512.2:29862:GAGAATGACAAAAAAAAAAAAAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAAAAAAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0‰ |
1
|
NC_045512.2:29862:GAGAATGACAAAAAAAAA->G |
2697049 |
NC_045512.2 |
29862 |
GAGAATGACAAAAAAAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29861:G->ACTTAGGCGAC |
2697049 |
NC_045512.2 |
29861 |
G |
ACTTAGGCGAC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29861:G->GATTCAACT |
2697049 |
NC_045512.2 |
29861 |
G |
GATTCAACT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29861:GGAGAAT->G |
2697049 |
NC_045512.2 |
29861 |
GGAGAAT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0‰ |
1
|
NC_045512.2:29861:G->GC |
2697049 |
NC_045512.2 |
29861 |
G |
GC |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29861:G->GT |
2697049 |
NC_045512.2 |
29861 |
G |
GT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Tunisia |
0‰ |
1
|
NC_045512.2:29861:GGA->G |
2697049 |
NC_045512.2 |
29861 |
GGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0‰ |
1
|
NC_045512.2:29861:GGAGA->G |
2697049 |
NC_045512.2 |
29861 |
GGAGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
2
|
NC_045512.2:29861:GGAGAATGA->G |
2697049 |
NC_045512.2 |
29861 |
GGAGAATGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Vietnam |
0‰ |
2
|