The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29861:G->A |
2697049 |
NC_045512.2 |
29861 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
China,
Italy,
Malaysia,
Chile,
Russia,
Spain,
查看全部
|
0.0134‰ |
310
|
NC_045512.2:29861:G->C |
2697049 |
NC_045512.2 |
29861 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,China,Chile |
0.0025‰ |
59
|
NC_045512.2:29861:G->T |
2697049 |
NC_045512.2 |
29861 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Greece,
United States,
China,
Chile,
Costa Rica,
查看全部
|
0.0063‰ |
147
|
NC_045512.2:29860:A->GGAAAT |
2697049 |
NC_045512.2 |
29860 |
A |
GGAAAT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29860:A->AGGAACCAAT |
2697049 |
NC_045512.2 |
29860 |
A |
AGGAACCAAT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29860:AGGAG->A |
2697049 |
NC_045512.2 |
29860 |
AGGAG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Malaysia |
0‰ |
2
|
NC_045512.2:29860:AG->A |
2697049 |
NC_045512.2 |
29860 |
AG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0.0003‰ |
7
|
NC_045512.2:29860:A->AATC |
2697049 |
NC_045512.2 |
29860 |
A |
AATC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0‰ |
1
|
NC_045512.2:29860:A->ATCTGCAACTCGTTCCTC |
2697049 |
NC_045512.2 |
29860 |
A |
ATCTGCAACTCGTTCCTC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Malaysia |
0‰ |
1
|
NC_045512.2:29860:A->AT |
2697049 |
NC_045512.2 |
29860 |
A |
AT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0003‰ |
8
|
NC_045512.2:29860:AGGAGAAT->A |
2697049 |
NC_045512.2 |
29860 |
AGGAGAAT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.0001‰ |
4
|
NC_045512.2:29860:A->G |
2697049 |
NC_045512.2 |
29860 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0.0019‰ |
44
|
NC_045512.2:29860:A->C |
2697049 |
NC_045512.2 |
29860 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile,Thailand,Russia |
0.0026‰ |
60
|
NC_045512.2:29860:A->T |
2697049 |
NC_045512.2 |
29860 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Spain |
0.0025‰ |
58
|
NC_045512.2:29859:TAG->T |
2697049 |
NC_045512.2 |
29859 |
TAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29859:TAGG->T |
2697049 |
NC_045512.2 |
29859 |
TAGG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0‰ |
1
|
NC_045512.2:29859:TAGGAGAATGACAAAAAAAAAAAAAAAAA->C |
2697049 |
NC_045512.2 |
29859 |
TAGGAGAATGACAAAAAAAAAAAAAAAAA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29859:TAGGAGAATGACAAAAAAAAAAAAA->T |
2697049 |
NC_045512.2 |
29859 |
TAGGAGAATGACAAAAAAAAAAAAA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29859:TAGGAGAATGACA->T |
2697049 |
NC_045512.2 |
29859 |
TAGGAGAATGACA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29859:TAGGAGA->T |
2697049 |
NC_045512.2 |
29859 |
TAGGAGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Brazil |
0‰ |
1
|