The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29856:TC->T |
2697049 |
NC_045512.2 |
29856 |
TC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29856:T->A |
2697049 |
NC_045512.2 |
29856 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,China |
0.001‰ |
23
|
NC_045512.2:29856:T->C |
2697049 |
NC_045512.2 |
29856 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,
Bangladesh,
United States,
Spain,
查看全部
|
0.0042‰ |
98
|
NC_045512.2:29856:T->G |
2697049 |
NC_045512.2 |
29856 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,Chile,Costa Rica |
0.0042‰ |
98
|
NC_045512.2:29855:T->TTTAGC |
2697049 |
NC_045512.2 |
29855 |
T |
TTTAGC |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29855:T->TC |
2697049 |
NC_045512.2 |
29855 |
T |
TC |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29855:TTCTTAGGAG->T |
2697049 |
NC_045512.2 |
29855 |
TTCTTAGGAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29855:TTCTTAGGAGAATG->T |
2697049 |
NC_045512.2 |
29855 |
TTCTTAGGAGAATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
2
|
NC_045512.2:29855:T->TTCTGTC |
2697049 |
NC_045512.2 |
29855 |
T |
TTCTGTC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0002‰ |
6
|
NC_045512.2:29855:T->TTTTTC |
2697049 |
NC_045512.2 |
29855 |
T |
TTTTTC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29855:T->A |
2697049 |
NC_045512.2 |
29855 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0006‰ |
15
|
NC_045512.2:29855:T->C |
2697049 |
NC_045512.2 |
29855 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,Georgia,Australia |
0.0017‰ |
40
|
NC_045512.2:29855:T->G |
2697049 |
NC_045512.2 |
29855 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,China |
0.0004‰ |
10
|
NC_045512.2:29854:C->CA |
2697049 |
NC_045512.2 |
29854 |
C |
CA |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29854:CTTCTTAGGAGA->C |
2697049 |
NC_045512.2 |
29854 |
CTTCTTAGGAGA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|
NC_045512.2:29854:CT->C |
2697049 |
NC_045512.2 |
29854 |
CT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29854:C->TGCTATCCCCATGTG |
2697049 |
NC_045512.2 |
29854 |
C |
TGCTATCCCCATGTG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29854:C->TGCTA |
2697049 |
NC_045512.2 |
29854 |
C |
TGCTA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29854:C->CCTGT |
2697049 |
NC_045512.2 |
29854 |
C |
CCTGT |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29854:C->T |
2697049 |
NC_045512.2 |
29854 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0027‰ |
64
|