The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29854:CTTCTTAGGAGAATGA->C |
2697049 |
NC_045512.2 |
29854 |
CTTCTTAGGAGAATGA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29854:C->G |
2697049 |
NC_045512.2 |
29854 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0009‰ |
21
|
NC_045512.2:29854:C->A |
2697049 |
NC_045512.2 |
29854 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0042‰ |
97
|
NC_045512.2:29853:GCT->G |
2697049 |
NC_045512.2 |
29853 |
GCT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0002‰ |
5
|
NC_045512.2:29853:G->DASSBSAHCHADBCHAASC |
2697049 |
NC_045512.2 |
29853 |
G |
DASSBSAHCHADBCHAASC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29853:GCTT->G |
2697049 |
NC_045512.2 |
29853 |
GCTT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29853:G->GAAGTTACTTGTTTAAATTTCCA |
2697049 |
NC_045512.2 |
29853 |
G |
GAAGTTACTTGTTTAAATTTCCA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Malaysia |
0‰ |
1
|
NC_045512.2:29853:G->GTT |
2697049 |
NC_045512.2 |
29853 |
G |
GTT |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Africa |
0‰ |
1
|
NC_045512.2:29853:GC->G |
2697049 |
NC_045512.2 |
29853 |
GC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0.0006‰ |
14
|
NC_045512.2:29853:GCTTCTTAGGAGAA->G |
2697049 |
NC_045512.2 |
29853 |
GCTTCTTAGGAGAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29853:GCTTCTTAGGAGAATGA->G |
2697049 |
NC_045512.2 |
29853 |
GCTTCTTAGGAGAATGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29853:GCTTCTT->G |
2697049 |
NC_045512.2 |
29853 |
GCTTCTT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29853:G->GV |
2697049 |
NC_045512.2 |
29853 |
G |
GV |
indel |
downstream |
|
|
|
|
Homo sapiens |
Turkey |
0‰ |
2
|
NC_045512.2:29853:G->T |
2697049 |
NC_045512.2 |
29853 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,China,Chile |
0.0018‰ |
43
|
NC_045512.2:29853:G->A |
2697049 |
NC_045512.2 |
29853 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,
Bangladesh,
China,
Spain,
Russia,
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|
0.0035‰ |
82
|
NC_045512.2:29853:G->C |
2697049 |
NC_045512.2 |
29853 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Chile |
0.0041‰ |
96
|
NC_045512.2:29852:AGCT->A |
2697049 |
NC_045512.2 |
29852 |
AGCT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
2
|
NC_045512.2:29852:AGCTT->A |
2697049 |
NC_045512.2 |
29852 |
AGCTT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29852:AGCT->A |
2697049 |
NC_045512.2 |
29852 |
AGCT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29852:A->GAAC |
2697049 |
NC_045512.2 |
29852 |
A |
GAAC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Malaysia |
0‰ |
1
|