The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29808:G->T |
2697049 |
NC_045512.2 |
29808 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0306‰ |
704
|
| NC_045512.2:29807:T->A |
2697049 |
NC_045512.2 |
29807 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0024‰ |
57
|
| NC_045512.2:29807:T->C |
2697049 |
NC_045512.2 |
29807 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Finland |
0.0003‰ |
7
|
| NC_045512.2:29806:ATGTGTAAAATTAATTTTAGTAGTGCT->A |
2697049 |
NC_045512.2 |
29806 |
ATGTGTAAAATTAATTTTAGTAGTGCT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Colombia |
0‰ |
1
|
| NC_045512.2:29806:ATG->A |
2697049 |
NC_045512.2 |
29806 |
ATG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
2
|
| NC_045512.2:29806:ATGTGTAAAATTAATTTTAGTAGTGCT->A |
2697049 |
NC_045512.2 |
29806 |
ATGTGTAAAATTAATTTTAGTAGTGCT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Colombia |
0‰ |
1
|
| NC_045512.2:29806:ATG->A |
2697049 |
NC_045512.2 |
29806 |
ATG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
| NC_045512.2:29806:A->AAATC |
2697049 |
NC_045512.2 |
29806 |
A |
AAATC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0008‰ |
20
|
| NC_045512.2:29806:ATGTGTAAAATT->A |
2697049 |
NC_045512.2 |
29806 |
ATGTGTAAAATT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0029‰ |
67
|
| NC_045512.2:29806:A->AACGTGG |
2697049 |
NC_045512.2 |
29806 |
A |
AACGTGG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0‰ |
1
|
| NC_045512.2:29806:A->AGC |
2697049 |
NC_045512.2 |
29806 |
A |
AGC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
| NC_045512.2:29806:A->AG |
2697049 |
NC_045512.2 |
29806 |
A |
AG |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
| NC_045512.2:29806:A->C |
2697049 |
NC_045512.2 |
29806 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0005‰ |
12
|
| NC_045512.2:29806:A->G |
2697049 |
NC_045512.2 |
29806 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0049‰ |
113
|
| NC_045512.2:29806:A->T |
2697049 |
NC_045512.2 |
29806 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0009‰ |
22
|
| NC_045512.2:29805:A->T |
2697049 |
NC_045512.2 |
29805 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
| NC_045512.2:29805:A->G |
2697049 |
NC_045512.2 |
29805 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0027‰ |
64
|
| NC_045512.2:29805:A->C |
2697049 |
NC_045512.2 |
29805 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0002‰ |
6
|
| NC_045512.2:29804:T->G |
2697049 |
NC_045512.2 |
29804 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
| NC_045512.2:29804:T->C |
2697049 |
NC_045512.2 |
29804 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Uganda |
0.0016‰ |
39
|