The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29819:ATT->A |
2697049 |
NC_045512.2 |
29819 |
ATT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0002‰ |
6
|
NC_045512.2:29819:AT->A |
2697049 |
NC_045512.2 |
29819 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0015‰ |
36
|
NC_045512.2:29819:A->ATTT |
2697049 |
NC_045512.2 |
29819 |
A |
ATTT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0‰ |
2
|
NC_045512.2:29819:A->T |
2697049 |
NC_045512.2 |
29819 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,United Kingdom,Malaysia |
0.0006‰ |
14
|
NC_045512.2:29819:A->G |
2697049 |
NC_045512.2 |
29819 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0004‰ |
10
|
NC_045512.2:29819:A->AT |
2697049 |
NC_045512.2 |
29819 |
A |
AT |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0002‰ |
5
|
NC_045512.2:29818:AATT->A |
2697049 |
NC_045512.2 |
29818 |
AATT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0002‰ |
6
|
NC_045512.2:29818:A->C |
2697049 |
NC_045512.2 |
29818 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.001‰ |
24
|
NC_045512.2:29818:A->T |
2697049 |
NC_045512.2 |
29818 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0002‰ |
6
|
NC_045512.2:29818:A->G |
2697049 |
NC_045512.2 |
29818 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0011‰ |
26
|
NC_045512.2:29817:TA->T |
2697049 |
NC_045512.2 |
29817 |
TA |
T |
indel |
downstream |
|
|
|
|
Neovison vison |
Denmark |
0‰ |
2
|
NC_045512.2:29817:T->G |
2697049 |
NC_045512.2 |
29817 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
France |
0.0002‰ |
5
|
NC_045512.2:29817:T->A |
2697049 |
NC_045512.2 |
29817 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Malaysia |
0.0002‰ |
5
|
NC_045512.2:29817:T->C |
2697049 |
NC_045512.2 |
29817 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0004‰ |
11
|
NC_045512.2:29817:T->TA |
2697049 |
NC_045512.2 |
29817 |
T |
TA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Brazil |
0‰ |
2
|
NC_045512.2:29816:T->G |
2697049 |
NC_045512.2 |
29816 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0011‰ |
26
|
NC_045512.2:29816:T->A |
2697049 |
NC_045512.2 |
29816 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Thailand |
0.0001‰ |
3
|
NC_045512.2:29816:T->C |
2697049 |
NC_045512.2 |
29816 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.001‰ |
25
|
NC_045512.2:29816:TTAATTTTAG->T |
2697049 |
NC_045512.2 |
29816 |
TTAATTTTAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
4
|
NC_045512.2:29815:ATT->A |
2697049 |
NC_045512.2 |
29815 |
ATT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|