The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29787:C->T |
2697049 |
NC_045512.2 |
29787 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.0048‰ |
111
|
NC_045512.2:29786:G->A |
2697049 |
NC_045512.2 |
29786 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0.0003‰ |
7
|
NC_045512.2:29786:G->T |
2697049 |
NC_045512.2 |
29786 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0.0003‰ |
8
|
NC_045512.2:29786:G->C |
2697049 |
NC_045512.2 |
29786 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Brazil |
0.0109‰ |
251
|
NC_045512.2:29785:T->G |
2697049 |
NC_045512.2 |
29785 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0002‰ |
6
|
NC_045512.2:29785:T->A |
2697049 |
NC_045512.2 |
29785 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0.0602‰ |
1386
|
NC_045512.2:29785:T->C |
2697049 |
NC_045512.2 |
29785 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0051‰ |
119
|
NC_045512.2:29784:C->G |
2697049 |
NC_045512.2 |
29784 |
C |
G |
snv |
downstream |
|
|
|
|
Human |
United States |
0.0001‰ |
3
|
NC_045512.2:29784:C->A |
2697049 |
NC_045512.2 |
29784 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0001‰ |
3
|
NC_045512.2:29784:C->T |
2697049 |
NC_045512.2 |
29784 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Scotland,United Kingdom |
0.1535‰ |
3531
|
NC_045512.2:29783:G->A |
2697049 |
NC_045512.2 |
29783 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.001‰ |
23
|
NC_045512.2:29783:G->C |
2697049 |
NC_045512.2 |
29783 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0041‰ |
95
|
NC_045512.2:29783:G->T |
2697049 |
NC_045512.2 |
29783 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Austria,United States,Brazil |
0.0193‰ |
446
|
NC_045512.2:29782:A->AATGTG |
2697049 |
NC_045512.2 |
29782 |
A |
AATGTG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
NC_045512.2:29782:A->T |
2697049 |
NC_045512.2 |
29782 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0059‰ |
137
|
NC_045512.2:29782:A->G |
2697049 |
NC_045512.2 |
29782 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0019‰ |
44
|
NC_045512.2:29782:A->C |
2697049 |
NC_045512.2 |
29782 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Brazil |
0.0111‰ |
256
|
NC_045512.2:29781:GA->G |
2697049 |
NC_045512.2 |
29781 |
GA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29781:G->A |
2697049 |
NC_045512.2 |
29781 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0058‰ |
135
|
NC_045512.2:29781:G->C |
2697049 |
NC_045512.2 |
29781 |
G |
C |
snv |
downstream |
|
|
|
|
Human |
United States |
0.003‰ |
70
|