The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29781:G->T |
2697049 |
NC_045512.2 |
29781 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
United Kingdom,
Israel,
Spain,
查看全部
|
0.0887‰ |
2041
|
| NC_045512.2:29780:A->T |
2697049 |
NC_045512.2 |
29780 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0049‰ |
113
|
| NC_045512.2:29780:A->G |
2697049 |
NC_045512.2 |
29780 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0026‰ |
60
|
| NC_045512.2:29780:A->C |
2697049 |
NC_045512.2 |
29780 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Scotland |
0.0005‰ |
13
|
| NC_045512.2:29779:GA->G |
2697049 |
NC_045512.2 |
29779 |
GA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29779:G->GTAATTTTACACATT |
2697049 |
NC_045512.2 |
29779 |
G |
GTAATTTTACACATT |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29779:G->A |
2697049 |
NC_045512.2 |
29779 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0012‰ |
29
|
| NC_045512.2:29779:G->T |
2697049 |
NC_045512.2 |
29779 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Denmark,
United Kingdom,
Australia,
Switzerland,
Iceland,
Spain,
查看全部
|
0.212‰ |
4877
|
| NC_045512.2:29779:G->C |
2697049 |
NC_045512.2 |
29779 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0028‰ |
66
|
| NC_045512.2:29778:GGAGA->G |
2697049 |
NC_045512.2 |
29778 |
GGAGA |
G |
indel |
downstream |
|
|
|
|
Human |
Japan |
0.0002‰ |
6
|
| NC_045512.2:29778:GGA->G |
2697049 |
NC_045512.2 |
29778 |
GGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Netherlands |
0.0003‰ |
8
|
| NC_045512.2:29778:G->C |
2697049 |
NC_045512.2 |
29778 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0003‰ |
8
|
| NC_045512.2:29778:G->T |
2697049 |
NC_045512.2 |
29778 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom |
0.007‰ |
161
|
| NC_045512.2:29778:G->A |
2697049 |
NC_045512.2 |
29778 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Scotland,United Kingdom |
0.0081‰ |
187
|
| NC_045512.2:29777:G->C |
2697049 |
NC_045512.2 |
29777 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0004‰ |
11
|
| NC_045512.2:29777:G->T |
2697049 |
NC_045512.2 |
29777 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Denmark,United Kingdom,France |
0.0336‰ |
775
|
| NC_045512.2:29777:G->A |
2697049 |
NC_045512.2 |
29777 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0022‰ |
51
|
| NC_045512.2:29776:AG->A |
2697049 |
NC_045512.2 |
29776 |
AG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
| NC_045512.2:29776:A->C |
2697049 |
NC_045512.2 |
29776 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0046‰ |
107
|
| NC_045512.2:29776:A->T |
2697049 |
NC_045512.2 |
29776 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0022‰ |
52
|