The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29723:A->T |
2697049 |
NC_045512.2 |
29723 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0056‰ |
130
|
| NC_045512.2:29723:A->G |
2697049 |
NC_045512.2 |
29723 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Uganda,Russia |
0.0022‰ |
52
|
| NC_045512.2:29722:CACATTTT->C |
2697049 |
NC_045512.2 |
29722 |
CACATTTT |
C |
indel |
downstream |
|
|
|
|
Human |
United Kingdom |
0‰ |
2
|
| NC_045512.2:29722:C->G |
2697049 |
NC_045512.2 |
29722 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Brazil |
0.0001‰ |
3
|
| NC_045512.2:29722:C->A |
2697049 |
NC_045512.2 |
29722 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0002‰ |
5
|
| NC_045512.2:29722:CACATTTTCACCGAGGCCACGCGGAGTACG->C |
2697049 |
NC_045512.2 |
29722 |
CACATTTTCACCGAGGCCACGCGGAGTACG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
2
|
| NC_045512.2:29722:CA->C |
2697049 |
NC_045512.2 |
29722 |
CA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0‰ |
1
|
| NC_045512.2:29722:C->T |
2697049 |
NC_045512.2 |
29722 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom,India |
0.0232‰ |
535
|
| NC_045512.2:29721:CCACATTTTCACCGAG->C |
2697049 |
NC_045512.2 |
29721 |
CCACATTTTCACCGAG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
| NC_045512.2:29721:CCACATTTTCA->C |
2697049 |
NC_045512.2 |
29721 |
CCACATTTTCA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
3
|
| NC_045512.2:29721:C->G |
2697049 |
NC_045512.2 |
29721 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Switzerland |
0.0003‰ |
7
|
| NC_045512.2:29721:C->CCA |
2697049 |
NC_045512.2 |
29721 |
C |
CCA |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
| NC_045512.2:29721:CCACATTTT->C |
2697049 |
NC_045512.2 |
29721 |
CCACATTTT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.0003‰ |
9
|
| NC_045512.2:29721:CCA->C |
2697049 |
NC_045512.2 |
29721 |
CCA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0021‰ |
49
|
| NC_045512.2:29721:CCACATTTTCACCGAGG->C |
2697049 |
NC_045512.2 |
29721 |
CCACATTTTCACCGAGG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0‰ |
1
|
| NC_045512.2:29721:C->A |
2697049 |
NC_045512.2 |
29721 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0008‰ |
19
|
| NC_045512.2:29721:C->T |
2697049 |
NC_045512.2 |
29721 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0477‰ |
1099
|
| NC_045512.2:29720:AC->A |
2697049 |
NC_045512.2 |
29720 |
AC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0003‰ |
8
|
| NC_045512.2:29720:A->ACAT |
2697049 |
NC_045512.2 |
29720 |
A |
ACAT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
| NC_045512.2:29720:A->T |
2697049 |
NC_045512.2 |
29720 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0001‰ |
3
|