The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29728:T->G |
2697049 |
NC_045512.2 |
29728 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0025‰ |
59
|
NC_045512.2:29727:T->TGG |
2697049 |
NC_045512.2 |
29727 |
T |
TGG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Switzerland |
0‰ |
1
|
NC_045512.2:29727:TTTCACCGAGGCCACGCGGAG->T |
2697049 |
NC_045512.2 |
29727 |
TTTCACCGAGGCCACGCGGAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
2
|
NC_045512.2:29727:TTTCACCGAGGCCACGCGGAGTACGATC->T |
2697049 |
NC_045512.2 |
29727 |
TTTCACCGAGGCCACGCGGAGTACGATC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
NC_045512.2:29727:TTTCACCGAGGCCACGCGGAGTACG->T |
2697049 |
NC_045512.2 |
29727 |
TTTCACCGAGGCCACGCGGAGTACG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
4
|
NC_045512.2:29727:TTTCACCGAGGCCACGCGGAGTA->T |
2697049 |
NC_045512.2 |
29727 |
TTTCACCGAGGCCACGCGGAGTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0.0002‰ |
5
|
NC_045512.2:29727:TTTC->T |
2697049 |
NC_045512.2 |
29727 |
TTTC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0015‰ |
35
|
NC_045512.2:29727:T->C |
2697049 |
NC_045512.2 |
29727 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0005‰ |
12
|
NC_045512.2:29727:T->G |
2697049 |
NC_045512.2 |
29727 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0042‰ |
98
|
NC_045512.2:29727:TTTCACCGA->T |
2697049 |
NC_045512.2 |
29727 |
TTTCACCGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Kenya |
0.0002‰ |
5
|
NC_045512.2:29727:T->A |
2697049 |
NC_045512.2 |
29727 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0007‰ |
17
|
NC_045512.2:29726:TTTTCACCGAGGCCACGCGGAG->T |
2697049 |
NC_045512.2 |
29726 |
TTTTCACCGAGGCCACGCGGAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0002‰ |
5
|
NC_045512.2:29726:T->G |
2697049 |
NC_045512.2 |
29726 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
South Africa |
0.0002‰ |
6
|
NC_045512.2:29726:T->C |
2697049 |
NC_045512.2 |
29726 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0018‰ |
42
|
NC_045512.2:29726:T->A |
2697049 |
NC_045512.2 |
29726 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.004‰ |
94
|
NC_045512.2:29725:ATTTTCACCGAGGCCACGCGGAG->A |
2697049 |
NC_045512.2 |
29725 |
ATTTTCACCGAGGCCACGCGGAG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Czech Republic |
0‰ |
1
|
NC_045512.2:29725:ATTTT->A |
2697049 |
NC_045512.2 |
29725 |
ATTTT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Indonesia |
0‰ |
1
|
NC_045512.2:29725:ATTTT->A |
2697049 |
NC_045512.2 |
29725 |
ATTTT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Indonesia |
0‰ |
1
|
NC_045512.2:29725:ATTTTCACCGAGGCCACGCGGAGT->A |
2697049 |
NC_045512.2 |
29725 |
ATTTTCACCGAGGCCACGCGGAGT |
A |
indel |
downstream |
|
|
|
|
Human |
Switzerland |
0‰ |
1
|
NC_045512.2:29725:ATTTTCACCGAGGCC->A |
2697049 |
NC_045512.2 |
29725 |
ATTTTCACCGAGGCC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0‰ |
1
|