The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29725:A->C |
2697049 |
NC_045512.2 |
29725 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0038‰ |
89
|
| NC_045512.2:29725:A->AT |
2697049 |
NC_045512.2 |
29725 |
A |
AT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0‰ |
2
|
| NC_045512.2:29725:A->T |
2697049 |
NC_045512.2 |
29725 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0014‰ |
34
|
| NC_045512.2:29725:ATTT->A |
2697049 |
NC_045512.2 |
29725 |
ATTT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Netherlands |
0.0008‰ |
19
|
| NC_045512.2:29725:ATT->A |
2697049 |
NC_045512.2 |
29725 |
ATT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom,Australia |
0.0101‰ |
233
|
| NC_045512.2:29725:A->G |
2697049 |
NC_045512.2 |
29725 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom |
0.0023‰ |
53
|
| NC_045512.2:29725:AT->A |
2697049 |
NC_045512.2 |
29725 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom |
0.0654‰ |
1505
|
| NC_045512.2:29724:CATTTTCACCGAGGCCACGCGGAGT->C |
2697049 |
NC_045512.2 |
29724 |
CATTTTCACCGAGGCCACGCGGAGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
| NC_045512.2:29724:C->G |
2697049 |
NC_045512.2 |
29724 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Poland |
0‰ |
1
|
| NC_045512.2:29724:CATTTTCACCGAGGCCA->C |
2697049 |
NC_045512.2 |
29724 |
CATTTTCACCGAGGCCA |
C |
indel |
downstream |
|
|
|
|
Human |
United States |
0‰ |
1
|
| NC_045512.2:29724:CATTTTCACCGAGGCCACGCGGA->C |
2697049 |
NC_045512.2 |
29724 |
CATTTTCACCGAGGCCACGCGGA |
C |
indel |
downstream |
|
|
|
|
Human |
United States |
0‰ |
1
|
| NC_045512.2:29724:CATTTTCACCGAGGCCACGCGGAGTACGAT->C |
2697049 |
NC_045512.2 |
29724 |
CATTTTCACCGAGGCCACGCGGAGTACGAT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0‰ |
2
|
| NC_045512.2:29724:C->A |
2697049 |
NC_045512.2 |
29724 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0058‰ |
135
|
| NC_045512.2:29724:C->TA |
2697049 |
NC_045512.2 |
29724 |
C |
TA |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0023‰ |
53
|
| NC_045512.2:29724:C->T |
2697049 |
NC_045512.2 |
29724 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom,France |
0.031‰ |
714
|
| NC_045512.2:29723:ACATTTT->A |
2697049 |
NC_045512.2 |
29723 |
ACATTTT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Austria |
0.0002‰ |
6
|
| NC_045512.2:29723:ACATTTTCACCGAGGC->A |
2697049 |
NC_045512.2 |
29723 |
ACATTTTCACCGAGGC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0.0003‰ |
8
|
| NC_045512.2:29723:ACATTT->A |
2697049 |
NC_045512.2 |
29723 |
ACATTT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
| NC_045512.2:29723:ACATTTTCACCGAGGCCACGCGGAGT->A |
2697049 |
NC_045512.2 |
29723 |
ACATTTTCACCGAGGCCACGCGGAGT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0005‰ |
13
|
| NC_045512.2:29723:ACATT->A |
2697049 |
NC_045512.2 |
29723 |
ACATT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Netherlands |
0‰ |
1
|