Drug ID:Drug64
Drug Name:Methotrexate
CID:126941
DrugBank ID:DB00563
Modality:Small Molecule
Groups:approved
US Approved:YES
Other Approved:YES
Identifier: NCT00035074, , NCT02413047, , NCT01393405, , NCT00498589
Molecular Formula:C20H22N8O5
Molecular Weight:454.4 g/mol
Isomeric SMILES:CN(CC1=CN=C2C(=N1)C(=NC(=N2)N)N)C3=CC=C(C=C3)C(=O)N[C@@H](CCC(=O)O)C(=O)O
Synonyms:methotrexate; 59-05-2; Rheumatrex; Amethopterin; Methylaminopterin; Metatrexan; Hdmtx; Ledertrexate; Methylaminopterinum; MTX
Phase 0: 18
Phase 1: 204
Phase 2: 717
Phase 3: 465
Phase 4: 225
Description:An antineoplastic antimetabolite with immunosuppressant properties. It is an inhibitor of tetrahydrofolate dehydrogenase and prevents the formation of tetrahydrofolate, necessary for synthesis of thymidylate, an essential component of DNA. [PubChem]

Molecular Structure

2D Molecular Structure

Knowledge Graph

dtIDCIDCompound NameGene IDGene NameSpeciesPubMed IDsAction
dt570 126941 Methotrexate 3417 IDH1 Homo sapiens (human) None
dt571 126941 Methotrexate 1014 CDH16 Homo sapiens (human) Inhibitor
dt572 126941 Methotrexate 10919 EHMT2 Homo sapiens (human) None
dt573 126941 Methotrexate 5423 POLB Homo sapiens (human) None
dt574 126941 Methotrexate 93777387 folA Escherichia coli K-12 16873019 None
dt575 126941 Methotrexate 1719 DHFR Homo sapiens (human) 12872145 DHFR protein polymorphism results in decreased susceptibility to folic acid antagonists
dt576 126941 Methotrexate 2940 GSTA3 Rattus norvegicus (Norway rat) 12872145 GSTA3 protein results in decreased susceptibility to folic acid antagonists
dt577 126941 Methotrexate 23435 TARDBP Homo sapiens (human) None
dt578 126941 Methotrexate 4780 NFE2L2 Homo sapiens (human) None

  • No data available

Phase Distribution
Phase Description
  • Phase 0: Exploratory trials to assess drug behavior in humans
  • Phase 1: Safety trials to determine safe dosage range
  • Phase 2: Efficacy trials to evaluate therapeutic effects
  • Phase 3: Large-scale trials to confirm efficacy and safety
  • Phase 4: Post-marketing surveillance for long-term safety and efficacy

Trial IDTitlePhaseStatusSponsorIndicationsInterventions
NCT07138898 Immunosuppressant Management in Rheumatology Patients Undergoing Elective Total Shoulder Arthroplasty PHASE2 NOT_YET_RECRUITING NYU Langone Health Rheumatic Disease DRUG: Methotrexate|DRUG: Sulfasalazine|DRUG: Hydr… Details
NCT05072782 Management of Moderate POstoperative Recurrence in Crohn's Disease: a randoMizEd contROLled Trial of Therapeutic Escalation, the POMEROL Trial. (POMEROL) PHASE4 UNKNOWN Groupe d'Etude Therapeutique des Affections Inflammatoires Digestives Crohn Disease DRUG: Infliximab CT-P13|DRUG: Immunosuppressors (… Details
NCT05040464 Comparison of Azathioprine to Methotrexate in Combination Therapy With Adalimumab in Crohn's Disease: an Open-label Randomized Controlled Trial PHASE3 RECRUITING Centre Hospitalier Universitaire, Amiens Crohn Disease|Azathioprine|Methotrexate DRUG: AZA capsules|DRUG: MTX|BIOLOGICAL: blood sa… Details
NCT04205734 Methotrexate Polyglutamate Measurements in Patients With Inflammatory Bowel Disease NULL SUSPENDED Boston Children's Hospital IBD DIAGNOSTIC_TEST: MTX Assessment Details
NCT04196920 Methotrexate-associated Anti-TNF Combination Therapy, the Neglected One ! NULL UNKNOWN University Hospital, Montpellier Chronic Inflammatory Bowel Disease None Details
NCT03531593 Dose Effect Relationship of MTX and IBD NULL COMPLETED Children's Mercy Hospital Kansas City Inflammatory Bowel Diseases|Liver Fibroses|Methot… DIAGNOSTIC_TEST: Ultrasound Elastography Details
NCT03204136 Tacrolimus Versus Methotrexate as Rescue Therapy for Refractory Inflammatory Bowel Disease NULL UNKNOWN Key Laboratory of Gastroenterology and Hepatology, Ministry of Health, China Inflammatory Bowel Diseases None Details
NCT02852694 Reduce Risk for Crohn's Disease Patients PHASE4 COMPLETED PIBD-Net Crohn's Disease DRUG: Methotrexate|DRUG: Adalimumab|DRUG: Azathio… Details
NCT02764762 Triple Combination Therapy in High Risk Crohn's Disease (CD) PHASE4 COMPLETED Takeda Crohn Disease DRUG: Vedolizumab|DRUG: Adalimumab|DRUG: Methotre… Details
NCT02461784 The Effect of Methotrexate on Sperm Quality in Men With Inflammatory Bowel Disease NULL TERMINATED University of Wisconsin, Madison Inflammatory Bowel Disease (IBD) PROCEDURE: Semen & Data Collection Details
NCT02413047 Evaluate if Response to Infliximab or Adalimumab May be Regained With an Immunomodulator NA TERMINATED Indiana University Inflammatory Bowel Disease|Ulcerative Colitis|Cro… DRUG: Azathioprine|DRUG: 6 mercaptopurine|DRUG: M… Details
NCT02269358 Salvage Therapy With High/Low Methotrexate for Loss of Response to Infliximab Dose Escalation PHASE4 COMPLETED Prof. Arie Levine Crohn's Disease DRUG: METHOTREXATE Details
NCT02177071 A proSpective Randomized Controlled Trial comParing infliximAb-antimetabolites Combination Therapy to Anti-metabolites monotheRapy and Infliximab monothErapy in Crohn's Disease Patients in Sustained Steroid-free Remission on Combination Therapy PHASE4 COMPLETED Groupe d'Etude Therapeutique des Affections Inflammatoires Digestives Crohn's Disease DRUG: INFLIXIMAB|DRUG: AZATHIOPRINE|DRUG: MERCAPT… Details
NCT01802593 Comparison of 2 Immunomodulator Withdrawal Schemes for Infliximab Monotherapy in Active Pediatric Crohn's Disease After Thiopurine Failure PHASE4 TERMINATED Prof. Arie Levine Crohn's Disease DRUG: AZATHIOPRINE or METHOTREXATE|DRUG: AZATHIOP… Details
NCT01716039 Pharmacokinetics of Adalimumab With Methotrexate for Treatment of Patients With Ulcerative Colitis (UC) PHASE2 TERMINATED Alimentiv Inc. Ulcerative Colitis DRUG: MTX 12.5|DRUG: MTX 25|DRUG: Adalimumab Details
NCT01393405 Methotrexate in Induction and Maintenance of Steroid Free Remission in Ulcerative Colitis PHASE2 COMPLETED University of North Carolina, Chapel Hill Ulcerative Colitis DRUG: Methotrexate Details
NCT00546546 Early Immunosuppressants in Crohn's Disease PHASE4 COMPLETED Groupe d'Etude Therapeutique des Affections Inflammatoires Digestives Crohn's Disease DRUG: early immunosuppressants (azathioprine, met… Details
NCT00498589 Comparison of Methotrexate vs Placebo in Corticosteroid-dependent Ulcerative Colitis PHASE2 COMPLETED Centre Hospitalier Universitaire de Besancon Ulcerative Colitis DRUG: methotrexate|DRUG: placebo Details
NCT00132899 COMMIT (Combination Of Maintenance Methotrexate-Infliximab Trial) PHASE3 COMPLETED University of Western Ontario, Canada Crohn's Disease DRUG: Methotrexate|DRUG: Placebo Details
NCT00035074 A Pharmacokinetic Study to Determine the Oral Bioavailability of Methotrexate in Patients With Inflammatory Bowel Disease NULL COMPLETED National Center for Research Resources (NCRR) Inflammatory Bowel Disease DRUG: Methotrexate Details

Disease IDDisease NameDefinitionCategoryRelated DrugsMechanism
No data available

Strategy IDTherapeutic StrategySynonymsRelated DrugsMechanism
S02 Immunosuppression Classic immunosuppressive drugs azathioprine; 6-mercaptopurine; methotrexate; ciclosporin-A; tacrolimus Ciclosporin-A and tacrolimus bind to specific intracellular… Details

Combating Methotrexate Resistance in Cancer Treatment: A Review on Navigating P…

PMID: 40270992
Year: 2025
Relationship Type: Treatment Score: 7.5

Methotrexate (MTX), a potent analogue and antagonist of folic acid, is a first-line treatment for rheumatoid arthritis, IBD and cancer. The developme…

Erythrocyte Methotrexate-Polyglutamate Concentrations in Pediatric Inflammatory…

PMID: 39982703
Year: 2025
Relationship Type: Treatment Score: 7.5

BACKGROUND AND AIMS: Therapeutic drug monitoring (TDM) of methotrexate (MTX) is challenging due to its pharmacokinetics and short plasma half-life. I…

Effectiveness and Tolerability of Methotrexate Combined with Biologics in Patie…

PMID: 38217678
Year: 2024
Relationship Type: Treatment Score: 7.5

BACKGROUND: Methotrexate (MTX) combination therapy with biological agents has gained increasing interest. Here, we assessed the efficacy and tolerabi…

Oral Versus Subcutaneous Methotrexate in Immune-Mediated Inflammatory Disorders…

PMID: 37768405
Year: 2023
Relationship Type: Treatment Score: 7.5

PURPOSE: This review aims to critically evaluate the potential benefit of either oral or subcutaneous administration of methotrexate (MTX) in various…

Therapeutic drug monitoring of methotrexate in patients with Crohn's disease

PMID: 37767910
Year: 2023
Relationship Type: Treatment Score: 7.5

BACKGROUND: Therapeutic drug monitoring (TDM) has the potential to improve efficacy and diminish side effects. Measuring methotrexate-polyglutamate (…

Colon-specific delivery of methotrexate using hyaluronic acid modified pH-respo…

PMID: 36804523
Year: 2023
Relationship Type: Treatment Score: 7.5

Oral immunosuppressant methotrexate (MTX) is an effective method for the treatment of inflammatory bowel disease (IBD). To overcome the defects of cl…

The Effectiveness and Safety of Methotrexate as the First-Line Immunomodulator …

PMID: 36754081
Year: 2023
Relationship Type: Treatment Score: 7.5

OBJECTIVES: Methotrexate (MTX) has been used as maintenance therapy for Crohn disease (CD) in adults and children. However, there are only a few stud…

A meta-analysis of methotrexate polyglutamates in relation to efficacy and toxi…

PMID: 36326810
Year: 2023
Relationship Type: Treatment Score: 7.5

AIMS: In immune-mediated inflammatory diseases (IMIDs), early symptom control is a key therapeutic goal. Methotrexate (MTX) is the first-line treatme…

Subcutaneous administration, higher age and lower renal function are associated…

PMID: 35907797
Year: 2022
Relationship Type: Treatment Score: 7.5

BACKGROUND: Methotrexate is an immunomodulatory drug for patients with Crohn's disease. Erythrocyte MTX-polyglutamates (MTX-PG(1-5)) may be used for …

Methotrexate for Primary Maintenance Therapy in Mild-to-Moderate Crohn Disease …

PMID: 35758420
Year: 2022
Relationship Type: Treatment Score: 7.5

OBJECTIVES: Despite limited data, methotrexate (MTX) is often used as primary maintenance therapy in pediatric Crohn disease (CD). We sought to asses…

Mucosal healing with methotrexate versus azathioprine treatment in pediatric Cr…

PMID: 35373937
Year: 2022
Relationship Type: Treatment Score: 7.5

BACKGROUND/OBJECTIVES: The current treatment goal for inflammatory bowel disease (IBD) is achievement of mucosal healing (MH). While established with…

Short-term tolerability and effectiveness of methotrexate monotherapy in adult …

PMID: 34539814
Year: 2021
Relationship Type: Treatment Score: 7.5

INTRODUCTION: Immunomodulators remain fundamental for the medical treatment of Crohn's disease (CD). Methotrexate (MTX) is widely used as a second-li…

Cost-Effectiveness Analysis of Parenteral Methotrexate for the Treatment of Cro…

PMID: 33426625
Year: 2021
Relationship Type: Treatment Score: 7.5

BACKGROUND: Despite worldwide use of parenteral methotrexate (pMTX), health economic evidence for its use in Crohn's disease (CD) is limited. The low…

Pharmacogenetic studies of thiopurine methyltransferase genotype-phenotype conc…

PMID: 32865889
Year: 2021
Relationship Type: Treatment Score: 7.5

The discovery and implementation of thiopurine methyltransferase (TPMT) pharmacogenetics has been a success story and has reduced the suffering from …

Protocol for a multinational risk-stratified randomised controlled trial in pae…

PMID: 32611737
Year: 2020
Relationship Type: Treatment Score: 7.5

INTRODUCTION: Immunomodulators such as thiopurines (azathioprine (AZA)/6-mercaptopurine (6MP)), methotrexate (MTX) and biologics such as adalimumab (…

How does methotrexate work?

PMID: 32239204
Year: 2020
Relationship Type: Treatment Score: 7.5

Developed over 70 years ago as an anti-folate chemotherapy agent, methotrexate (MTX) is a WHO 'essential medicine' that is now widely employed as a f…

Analytical methodologies for determination of methotrexate and its metabolites …

PMID: 31890337
Year: 2019
Relationship Type: Treatment Score: 7.5

Methotrexate (MTX) is a folate antagonist drug used for several diseases, such as cancers, various malignancies, rheumatoid arthritis (RA) and inflam…

[Successful treatment of gangrenous pyoderma with methotrexate in a patient wit…

PMID: 31333236
Year: 2019
Relationship Type: Treatment Score: 7.5

Pyoderma gangrenosum (PG) is a neutrophilic, cutaneous-ulcerative, non-infectious dermatosis that occurs in up to 2% of patients with Crohn's disease…

A single-center experience with methotrexate in the treatment of Chinese Crohn'…

PMID: 30516330
Year: 2018
Relationship Type: Treatment Score: 7.3

OBJECTIVE: Methotrexate (MTX) can be used as an alternative for patients with Crohn's disease (CD) who are intolerant of thiopurine. This retrospecti…

Methotrexate and Thioguanine Rescue Therapy for Conventional Thiopurine Failing…

PMID: 29668998
Year: 2018
Relationship Type: Treatment Score: 7.3

BACKGROUND: Patients with active ulcerative colitis (UC) failing conventional therapies are in need of rescue strategies. Due to the fact that accept…

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