Gene "AGT"
Found 8 records
Gene information
Genetic interaction partners
No data
Modifier statisitcs
Record:
8
Disorder:
7
Vriant:
4
Reference:
7
Effect type:
Expressivity(6)
,Penetrance(1)
,Pleiotropy(1)
Modifier effect:
Risk factor(3)
,Alter the occurrence of stroke(1)
,Altered incidence(1)
,Altered progression of CKD(1)
,Altered relation between body size and BP(1)
,Altered severity(1)
Details:
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Variant 1:Gene:Genomic location:dbSNP ID:Target disease:Sepsis(HP:0100806)Effect type:PenetranceModifier effect:Altered incidenceEvidence:Identified by leave-one-out cross-validation (LOOCV)experimentsEffect:the putative protein damaging alleles may be protective in case of sepsisReference:Title:Genetic Factors of the Disease Course After Sepsis: Rare Deleterious Variants Are PredictiveSpecies studied:HumanAbstract:Sepsis is a life-threatening organ dysfunction caused by dysregulated host response to infection. For its clinical course, host genetic factors are important and rare genomic variants are suspected to contribute. We sequenced the exomes of 59 Greek and 15 German patients with bacterial sepsis divided into two groups with extremely different disease courses. Variant analysis was focusing on rare deleterious single nucleotide variants (SNVs). We identified significant differences in the number of rare deleterious SNVs per patient between the ethnic groups. Classification experiments based on the data of the Greek patients allowed discrimination between the disease courses with estimated sensitivity and specificity>75%. By application of the trained model to the German patients we observed comparable discriminatory properties despite lower population-specific rare SNV load. Furthermore, rare SNVs in genes of cell signaling and innate immunity related pathways were identified as classifiers discriminating between the sepsis courses. Sepsis patients with favorable disease course after sepsis, even in the case of unfavorable preconditions, seem to be affected more often by rare deleterious SNVs in cell signaling and innate immunity related pathways, suggesting a protective role of impairments in these processes against a poor disease course.
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Variant 2:Gene:Genomic location:chr1:230845794dbSNP ID:Alias:AGT:p.M235T, AGT:M235TTarget disease:Dilated Cardiomyopathy(DOID_12930)Effect type:ExpressivityModifier effect:Risk factorEvidence:P<0.001Effect:235TT genotype of AGT (M235T) was significantly associated with enhanced risk of the disease phenotype in HCM, DCM, and RCM.Reference:Title:Renin-angiotensin system gene polymorphisms as potential modifiers of hypertrophic and dilated cardiomyopathy phenotypes.Species studied:HumanAbstract:The renin-angiotensin (RAS) pathway has an important role in the etiology of heart failure and given the importance of RAS as a therapeutic target in various cardiomyopathies, genetic polymorphisms in the RAS genes may modulate the risk and severity of disease in cardiomyopathy patients. In the present study, we examined the association of RAS pathway gene polymorphisms, angiotensin converting enzyme (ACE), angiotensinogen (AGT), and angiotensin receptor type 1 (AGTR1) with risk and disease severity in Asian Indian idiopathic cardiomyopathy patients. The case-control study was conducted in 400 cardiomyopathy patients diagnosed with HCM, DCM, or restrictive cardiomyopathy (RCM) and 235 healthy controls. Genotyping of patients and controls was done by PCR-RFLP assays. Left ventricular wall thickness and left ventricular ejection fraction were measured by means of M-mode echocardiography. We observed significantly higher prevalence of ACE DD and AGTR1 1166CC genotypes in hypertrophic cardiomyopathy (HCM) and dilated cardiomyopathy (DCM) patients. Also, 235TT genotype of AGT (M235T) was significantly associated with enhanced risk of the disease phenotype in HCM, DCM, and RCM.
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Variant 3:Gene:Genomic location:chr1:230845794dbSNP ID:Alias:AGT:p.M235T, AGT:M235TTarget disease:Gynaecopathia(No data)Effect type:ExpressivityModifier effect:Risk factorEvidence:From review articleEffect:Homozygous mutant carriage of SNPs predisposing to an elevated risk of early postmenopausal bone loss and osteoporosis, may be a new means to individualize the counseling on risks and benefits of ERT/HRT.Reference:Title:Applications of polymorphisms and pharmacogenomics in obstetrics and gynecology.Species studied:HumanAbstract:The number of reports investigating disease susceptibility based on the carriage of low-penetrance, high-frequency polymorphisms has steadily increased over the last years. Evidence based on meta-analyses of individual case-control studies is accumulating, defining specific individual variations in disease susceptibility. For example, genetic variations of the estradiol metabolism have been described as significant contributors to disease susceptibility with variations depending on ethnic background. In the field of obstetrics and gynecology, the genetic contribution of polymorphic markers to a series of disorders has been characterized. These disorders include recurrent pregnancy loss, pre-eclampsia, endometriosis, breast cancer, and hormone replacement therapy (HRT)-related complications such as thrombosis. Among other genetic markers, thrombophilic genetic variants, such as the Factor V Leiden and prothrombin G20210A polymorphisms, as well as genetic variants of cytochrome P450 (CYP) enzymes, for example, CYP19 and CYP1B1, have been established as genetic risk markers and disease modifiers of recurrent and sporadic pregnancy loss and HRT-independent and -dependent breast cancer, respectively. In addition, meta-analyses of data in the literature established the TGFBR1*6A, GSTP I105V, and TP53 R72P polymorphisms, as well as the GSTM1 gene deletion as low-penetrance genetic risk factors of sporadic breast cancer. With respect to genetic modulation of therapeutic effects, beneficial effects of estrogen replacement therapy and HRT are modulated by the carriage of single nucleotide polymorphisms, for example, osteoprotection and blood lipid changes by the estrogen receptor-alpha (ER-a) PvuII polymorphism. Polymorphisms of the catechol-O-methyltransferase (COMT), ER-alpha, IL-1 receptor antagonist, and Factor V genes have been demonstrated to modulate the timing of natural menopause. Lastly, a strong genetic contribution of polymorphisms to the development and the clinical course of endometriosis has been established with data pointing to polymorphisms of the COMT, GST, NAT-2, and ER-alpha genes as susceptibility markers. In summary, the available evidence points to a number of polymorphisms of a wide variety of genes as strong hereditary determinants of the susceptibility to benign and malignant gynecologic and obstetric conditions.
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Variant 4:Gene:Genomic location:chr1:230845794dbSNP ID:Alias:AGT:p.M235T, AGT:M235TTarget disease:Hypertrophic Cardiomyopathy(DOID_11984)Effect type:ExpressivityModifier effect:Altered severityEvidence:Assessment of genotype–phenotype associationsEffect:Severity of heart hypertrophy were associated with pejorative genotype of AGT M235T polymorphism and CMA1 A(-1903) polymorphismReference:Title:Renin-angiotensin-aldosterone system in hypertrophic cardiomyopathy.Species studied:HumanAbstract:Keeping in mind an important role of renin-angiotensin aldosterone system (RAS) in developing of cardiac remodeling and fibrosis, genetic polymorphisms coding its components could have influence with clinical variants of the course. Biomarkers could appear predictors of adverse. To examine the contribution of the RAS to developing of different hypertrophic cardiomyopathy (HCM) clinical variants of the course we studied 58 patients with HCM and controls comparable by age and gender. All patients were genotyped of gene polymorphisms CMA1 A(-1903)G rs1800875, AGTM235T rs699, AGTR1 A1166C rs5186, CYP11B2-344 T/C rs1799998. Angiotensin-converting enzyme (ACE) and angiotensin II (AII) levels were measured in 40 patients with HCM and 39 controls. We found out that AII were significantly decreased in patients with HCM than in healthy controls. The positive correlation between AII and left ventricle posterior wall (LVPW) were detected. Severity of heart hypertrophy were associated with pejorative genotype of AGT M235T polymorphism and CMA1 A(-1903) polymorphism. Significant association between the AG genotype of CMA1 A(-1903) polymorphism and angina class II-III and ventricular extrasystole of high gradation was observed. Our data not only support the hypothesis that RAAS polymorphisms may influence phenotype, but also allow for create new approaches to possible predicting adverse outcomes.
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Variant 5:Gene:Genomic location:chr1:230845794dbSNP ID:Alias:AGT:p.M235T, AGT:M235TTarget disease:Hypertrophic Cardiomyopathy(DOID_11984)Effect type:ExpressivityModifier effect:Risk factorEvidence:P=0.004Effect:235TT genotype of AGT (M235T) was significantly associated with enhanced risk of the disease phenotype in HCM, DCM, and RCM.Reference:Title:Renin-angiotensin system gene polymorphisms as potential modifiers of hypertrophic and dilated cardiomyopathy phenotypes.Species studied:HumanAbstract:The renin-angiotensin (RAS) pathway has an important role in the etiology of heart failure and given the importance of RAS as a therapeutic target in various cardiomyopathies, genetic polymorphisms in the RAS genes may modulate the risk and severity of disease in cardiomyopathy patients. In the present study, we examined the association of RAS pathway gene polymorphisms, angiotensin converting enzyme (ACE), angiotensinogen (AGT), and angiotensin receptor type 1 (AGTR1) with risk and disease severity in Asian Indian idiopathic cardiomyopathy patients. The case-control study was conducted in 400 cardiomyopathy patients diagnosed with HCM, DCM, or restrictive cardiomyopathy (RCM) and 235 healthy controls. Genotyping of patients and controls was done by PCR-RFLP assays. Left ventricular wall thickness and left ventricular ejection fraction were measured by means of M-mode echocardiography. We observed significantly higher prevalence of ACE DD and AGTR1 1166CC genotypes in hypertrophic cardiomyopathy (HCM) and dilated cardiomyopathy (DCM) patients. Also, 235TT genotype of AGT (M235T) was significantly associated with enhanced risk of the disease phenotype in HCM, DCM, and RCM.
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Variant 6:Gene:Genomic location:chr1:230845794dbSNP ID:Alias:AGT:p.M235T, AGT:M235TTarget disease:Sickle Cell Anemia(DOID_10923)Effect type:PleiotropyModifier effect:Alter the occurrence of strokeEvidence:OR=14.05, 95% CI: 3.82-28.91; P=0.001Effect:M235T genotype was a significant independent factor related to the occurrence of stroke among patients with SCDReference:Title:Angiotensinogen M235T Gene Polymorphism is a Genetic Determinant of Cerebrovascular and Cardiopulmonary Morbidity in Adolescents with Sickle Cell Disease.Species studied:HumanAbstract:Cerebrovascular stroke is a common critical complication of sickle cell disease (SCD). Angiotensinogen (AGT) M235T gene polymorphism is associated with risk of ischemic stroke and cardiovascular disease.
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Variant 7:Gene:Genomic location:chr1:230845977dbSNP ID:Target disease:Effect type:ExpressivityModifier effect:Altered progression of CKDEvidence:P<0.05Effect:Significant association between Thr207Met polymorphism of AGT and CKD progression and acts as an effect modifier of renal disease progression in ADPKD.Reference:Title:Angiotensinogen gene polymorphisms and progression of chronic kidney disease in ADPKD patients.Species studied:HumanAbstract:Autosomal dominant polycystic kidney disease (ADPKD) is a multisystemic and progressive disorder characterized by cyst formation and kidney enlargement and ultimately renal failure. Reduction of CKD progression in the ADPKD by pharmacological blockade of the renin-angiotensin-aldosterone system (RAAS) using ACE inhibitors indicated the involvement of RAAS pathway in the progression of CKD. The aim of the present study is to investigate the role of angiotensinogen tag-single nucleotide polymorphisms (AGT tag-SNPs) in progression of CKD.
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Variant 8:Gene:Genomic location:Target disease:Hypertension(DOID_10763)Effect type:ExpressivityModifier effect:Altered relation between body size and BPEvidence:N = 399, r = 0.23, P<0.0001Effect:AGT gene promoter region variant is an important modifier of the relation between body size and BP,corroborate the notion that genetic modifiers can produce a profound impact on BP-phenotypic relations.Reference:Title:Angiotensinogen gene promoter region variant modifies body size-ambulatory blood pressure relations in hypertension.Species studied:HumanAbstract:The extent to which genes modify the relationship between risk factors for hypertension and blood pressure (BP) is unclear. As angiotensinogen is expressed in adipose tissue and angiotensinogen (AGT) gene promoter variants influence the production of angiotensinogen, we evaluated the role of AGT gene variants as potential modifiers of body size-BP relations.