Gene "KCNH2"
Found 17 records
Gene information
Gene symbol:
KCNH2
See related:
Ensembl: ENSG00000055118, Gene ID: 3757
Additive variants :
Undetected
Genetic interaction partners
No data
Modifier statisitcs
Record:
17 
Disorder:
Vriant:
11 
Reference:
10 
Effect type:
Expressivity(15) ,Penetrance(2)  
Modifier effect:
Risk factor(8) ,Altered current amplitude(2) ,Altered gene activity(2) ,Altered incidence(2) ,Altered density of expressed heterozygous KCNH2 channels(1) ,Altered onset time(1) ,Altered severity(1)  
Details:
  • Variant 1:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Brugada Syndrome(DOID_0050451)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered gene activity 
    Evidence:
    Gene activity study 
    Effect:
    modify Brugada syndrome phenotype
    Reference:
    Title:
    Role of sequence variations in the human ether-a-go-go-related gene (HERG, KCNH2) in the Brugada syndrome.
    Species studied:
    Human
    Abstract:
    BACKGROUND:Brugada syndrome (BrS) is an inherited electrical disorder associated with a high incidence of sudden death. In a minority of patients, it has been linked to mutations in SCN5A, the gene encoding the pore-forming alpha-subunit of the cardiac Na(+) channel. Other causally related genes still await identification. We evaluated the role of HERG (KCNH2), which encodes the alpha-subunit of the rapid delayed rectifier K(+) channel (I(Kr)), in BrS. METHODS AND RESULTS:In two unrelated SCN5A mutation-negative patients, different amino acid changes in the C-terminal domain of the HERG channel (G873S and N985S) were identified. Voltage-clamp experiments on transfected HEK-293 cells show that these changes increase I(Kr) density and cause a negative shift of voltage-dependent inactivation, resulting in increased rectification. Action potential (AP) clamp experiments reveal increased transient HERG peak currents (I(peak)) during phase-0 and phase-1 of the ventricular AP, particularly at short cycle length. Computer simulations demonstrate that the increased I(peak) enhances the susceptibility to loss of the AP-dome typically in right ventricular subepicardial myocytes, thereby contributing to the BrS phenotype. CONCLUSION:Our study reveals a modulatory role of I(Kr) in BrS. These findings may provide better understanding of BrS and have implications for diagnosis and therapy.
  • Variant 2:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Long QT Syndrome(DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    Risk factor
    Reference:
    Title:
    Identification of a KCNQ1 polymorphism acting as a protective modifier against arrhythmic risk in long-QT syndrome.
    Species studied:
    Human
    Abstract:
    Long-QT syndrome (LQTS) is characterized by such striking clinical heterogeneity that, even among family members carrying the same mutation, clinical outcome can range between sudden death and no symptoms. We investigated the role of genetic variants as modifiers of risk for cardiac events in patients with LQTS.
  • Variant 3:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Long QT Syndrome(DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    Risk factor
    Reference:
    Title:
    Identification of a KCNQ1 polymorphism acting as a protective modifier against arrhythmic risk in long-QT syndrome.
    Species studied:
    Human
    Abstract:
    Long-QT syndrome (LQTS) is characterized by such striking clinical heterogeneity that, even among family members carrying the same mutation, clinical outcome can range between sudden death and no symptoms. We investigated the role of genetic variants as modifiers of risk for cardiac events in patients with LQTS.
  • Variant 4:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Long QT Syndrome(DOID_2843)
    Effect type:
    Penetrance 
    Modifier effect:
    Altered incidence 
    Evidence:
    From review article 
    Effect:
    Protective effect
    Reference:
    Title:
    Identification of a KCNQ1 polymorphism acting as a protective modifier against arrhythmic risk in long-QT syndrome.
    Species studied:
    Human
    Abstract:
    Long-QT syndrome (LQTS) is characterized by such striking clinical heterogeneity that, even among family members carrying the same mutation, clinical outcome can range between sudden death and no symptoms. We investigated the role of genetic variants as modifiers of risk for cardiac events in patients with LQTS.
  • Variant 5:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Brugada Syndrome(DOID_0050451)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered gene activity 
    Evidence:
    Gene activity study 
    Effect:
    modify Brugada syndrome phenotype
    Reference:
    Title:
    Role of sequence variations in the human ether-a-go-go-related gene (HERG, KCNH2) in the Brugada syndrome.
    Species studied:
    Human
    Abstract:
    BACKGROUND:Brugada syndrome (BrS) is an inherited electrical disorder associated with a high incidence of sudden death. In a minority of patients, it has been linked to mutations in SCN5A, the gene encoding the pore-forming alpha-subunit of the cardiac Na(+) channel. Other causally related genes still await identification. We evaluated the role of HERG (KCNH2), which encodes the alpha-subunit of the rapid delayed rectifier K(+) channel (I(Kr)), in BrS. METHODS AND RESULTS:In two unrelated SCN5A mutation-negative patients, different amino acid changes in the C-terminal domain of the HERG channel (G873S and N985S) were identified. Voltage-clamp experiments on transfected HEK-293 cells show that these changes increase I(Kr) density and cause a negative shift of voltage-dependent inactivation, resulting in increased rectification. Action potential (AP) clamp experiments reveal increased transient HERG peak currents (I(peak)) during phase-0 and phase-1 of the ventricular AP, particularly at short cycle length. Computer simulations demonstrate that the increased I(peak) enhances the susceptibility to loss of the AP-dome typically in right ventricular subepicardial myocytes, thereby contributing to the BrS phenotype. CONCLUSION:Our study reveals a modulatory role of I(Kr) in BrS. These findings may provide better understanding of BrS and have implications for diagnosis and therapy.
  • Variant 6:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Arrhythmia(HP:0011675)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    This genetic variance may contribute as a second genetic modifier for arrhythmia development is under current investigation.
    Reference:
    Title:
    Susceptibility genes and modifiers for cardiac arrhythmias.
    Species studied:
    Human
    Abstract:
    The last decade has seen a dramatic increase in the understanding of the molecular basis of arrhythmias. Much of this new information has been driven by genetic studies that focused on rare, monogenic arrhythmia syndromes that were accompanied or followed by cellular electrophysiological or biochemical studies. The marked clinical heterogeneity known from these familial arrhythmia syndromes has led to the development of a multifactorial (multi-hit) concept of arrhythmogenesis in which causal gene mutations have a major effect on disease expression that is further modified by other factors such as age, gender, sympathetic tone, and environmental triggers. Systematic genetic studies have unraveled an unexpected DNA sequence variance in these arrhythmia genes that has ethnic-specific patterns. Whether this genetic variance may contribute as a second genetic modifier for arrhythmia development is under current investigation. The aim of this article is to review common genetic variation in ion channel genes and to compare these recent findings.
  • Variant 7:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Arrhythmia(HP:0011675)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    This genetic variance may contribute as a second genetic modifier for arrhythmia development is under current investigation.
    Reference:
    Title:
    Susceptibility genes and modifiers for cardiac arrhythmias.
    Species studied:
    Human
    Abstract:
    The last decade has seen a dramatic increase in the understanding of the molecular basis of arrhythmias. Much of this new information has been driven by genetic studies that focused on rare, monogenic arrhythmia syndromes that were accompanied or followed by cellular electrophysiological or biochemical studies. The marked clinical heterogeneity known from these familial arrhythmia syndromes has led to the development of a multifactorial (multi-hit) concept of arrhythmogenesis in which causal gene mutations have a major effect on disease expression that is further modified by other factors such as age, gender, sympathetic tone, and environmental triggers. Systematic genetic studies have unraveled an unexpected DNA sequence variance in these arrhythmia genes that has ethnic-specific patterns. Whether this genetic variance may contribute as a second genetic modifier for arrhythmia development is under current investigation. The aim of this article is to review common genetic variation in ion channel genes and to compare these recent findings.
  • Variant 8:
    Gene:
    Genomic location:
    dbSNP ID:
    Target disease:
    Arrhythmia(HP:0011675)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered current amplitude 
    Evidence:
    From review article 
    Effect:
    Coexpression of KCNH2-A1116V and KCNH2-K897T channels together resulted in significantly reduced current amplitude
    Reference:
    Title:
    The primary arrhythmia syndromes: same mutation, different manifestations. Are we starting to understand why
    Species studied:
    Human
    Abstract:
    The discovery of pathogenic mutations primarily in genes encoding cardiac ion-channel proteins underlying the primary cardiac arrhythmia syndromes has had a remarkable impact on the management of these disorders, especially in patients with the long-QT syndrome. The availability of a genetic diagnostic test has added an important diagnostic tool, providing new opportunities for patient management such as early (presymptomatic) identification and treatment of patients at risk of developing fatal arrhythmias, risk stratification, and installation of gene-specific therapy. However, the fact that the identification of the causal mutation within a family allows diagnosis in other family members independently from the ECG features and arrhythmic manifestations quickly led to the recognition that extensive variability in clinical manifestations (e.g., extent of ECG abnormality and/or symptomatology) may be observed among family members carrying an identical mutation in a single ion channel gene. It is commonly held that this clinical variability stems from interactions between environmental and genetic modifiers with the particular pathogenic mutation. This Molecular Perspectives article reviews current knowledge on these modifiers of disease expression in the cardiac arrhythmia syndromes with particular reference to genetic modifiers.
  • Gene:
    Genomic location:
    chr7:150623137
    dbSNP ID:
    Target disease:
    Atrial Fibrillation(DOID_0060224)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered onset time 
    Evidence:
    OR=2.40, P=0.001 
    Effect:
    The variant rs2968863 (7q36.1), reported in GWAS to shorten the QTc interval, was found to be associated with early-onset lone AF
    Reference:
    Title:
    Genetic modifier of the QTc interval associated with early-onset atrial fibrillation.
    Species studied:
    Human
    Abstract:
    Both shortening and prolongation of the QTc interval have been associated with atrial fibrillation (AF). We investigated whether 8 single nucleotide polymorphisms (SNPs) at loci previously shown to affect QTc interval duration were associated with lone AF.
  • Gene:
    Genomic location:
    chr7:150645534
    dbSNP ID:
    Alias:
    KCNH2:p.Lys897Thr, KCNH2:p.K897T, KCNH2:K897T
    Target disease:
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    Gene activity study 
    Effect:
    KCNH2 polymorphism may modify the clinical expression of a latent LQT2 mutation and may contribute to the risk for sudden death in more prevalent cardiac diseases.
    Reference:
    Title:
    KCNH2-K897T is a genetic modifier of latent congenital long-QT syndrome.
    Species studied:
    Human
    Abstract:
    Clinical heterogeneity among patients with long-QT syndrome (LQTS) sharing the same disease-causing mutation is usually attributed to variable penetrance. One potential explanation for this phenomenon is the coexistence of modifier gene alleles, possibly common single nucleotide polymorphisms, altering arrhythmia susceptibility. We demonstrate this concept in a family segregating a novel, low-penetrant KCNH2 mutation along with a common single nucleotide polymorphism in the same gene.
  • Gene:
    Genomic location:
    chr7:150645534
    dbSNP ID:
    Alias:
    KCNH2:p.Lys897Thr, KCNH2:p.K897T, KCNH2:K897T
    Target disease:
    Arrhythmia(HP:0011675)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    This genetic variance may contribute as a second genetic modifier for arrhythmia development is under current investigation.
    Reference:
    Title:
    Susceptibility genes and modifiers for cardiac arrhythmias.
    Species studied:
    Human
    Abstract:
    The last decade has seen a dramatic increase in the understanding of the molecular basis of arrhythmias. Much of this new information has been driven by genetic studies that focused on rare, monogenic arrhythmia syndromes that were accompanied or followed by cellular electrophysiological or biochemical studies. The marked clinical heterogeneity known from these familial arrhythmia syndromes has led to the development of a multifactorial (multi-hit) concept of arrhythmogenesis in which causal gene mutations have a major effect on disease expression that is further modified by other factors such as age, gender, sympathetic tone, and environmental triggers. Systematic genetic studies have unraveled an unexpected DNA sequence variance in these arrhythmia genes that has ethnic-specific patterns. Whether this genetic variance may contribute as a second genetic modifier for arrhythmia development is under current investigation. The aim of this article is to review common genetic variation in ion channel genes and to compare these recent findings.
  • Gene:
    Genomic location:
    chr7:150645534
    dbSNP ID:
    Alias:
    KCNH2:p.Lys897Thr, KCNH2:p.K897T, KCNH2:K897T
    Target disease:
    Arrhythmia(HP:0011675)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered current amplitude 
    Evidence:
    From review article 
    Effect:
    Coexpression of KCNH2-A1116V and KCNH2-K897T channels together resulted in significantly reduced current amplitude
    Reference:
    Title:
    The primary arrhythmia syndromes: same mutation, different manifestations. Are we starting to understand why
    Species studied:
    Human
    Abstract:
    The discovery of pathogenic mutations primarily in genes encoding cardiac ion-channel proteins underlying the primary cardiac arrhythmia syndromes has had a remarkable impact on the management of these disorders, especially in patients with the long-QT syndrome. The availability of a genetic diagnostic test has added an important diagnostic tool, providing new opportunities for patient management such as early (presymptomatic) identification and treatment of patients at risk of developing fatal arrhythmias, risk stratification, and installation of gene-specific therapy. However, the fact that the identification of the causal mutation within a family allows diagnosis in other family members independently from the ECG features and arrhythmic manifestations quickly led to the recognition that extensive variability in clinical manifestations (e.g., extent of ECG abnormality and/or symptomatology) may be observed among family members carrying an identical mutation in a single ion channel gene. It is commonly held that this clinical variability stems from interactions between environmental and genetic modifiers with the particular pathogenic mutation. This Molecular Perspectives article reviews current knowledge on these modifiers of disease expression in the cardiac arrhythmia syndromes with particular reference to genetic modifiers.
  • Gene:
    Genomic location:
    chr7:150645534
    dbSNP ID:
    Alias:
    KCNH2:p.Lys897Thr, KCNH2:p.K897T, KCNH2:K897T
    Target disease:
    Long QT Syndrome(DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    Increase risk of cardiac events
    Reference:
    Title:
    Modifier genes for sudden cardiac death.
    Species studied:
    Human
    Abstract:
    Genetic conditions, even those associated with identical gene mutations, can present with variable clinical manifestations. One widely accepted explanation for this phenomenon is the existence of genetic factors capable of modifying the consequences of disease-causing mutations (modifier genes). Here, we address the concepts and principles by which genetic factors may be involved in modifying risk for cardiac arrhythmia, then discuss the current knowledge and interpretation of their contribution to clinical heterogeneity. We illustrate these concepts in the context of two important clinical conditions associated with risk for sudden cardiac death including a monogenic disorder (congenital long QT syndrome) in which the impact of modifier genes has been established, and a complex trait (life-threatening arrhythmias in acute myocardial infarction) for which the search for genetic modifiers of arrhythmic risk is more challenging. Advances in understanding the contribution of modifier genes to a higher or lower propensity towards sudden death should improve patient-specific risk stratification and be a major step towards precision medicine.
  • Gene:
    Genomic location:
    chr7:150645534
    dbSNP ID:
    Alias:
    KCNH2:p.Lys897Thr, KCNH2:p.K897T, KCNH2:K897T
    Target disease:
    Long QT Syndrome(DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    Pedigree analysis and gene activity study 
    Effect:
    KCNQ1-p.R583H, KCNH2-p.K897T, and KCNE1-p.G38S could be LQTS modifiers.
    Reference:
    Title:
    Allelic Complexity in Long QT Syndrome: A Family-Case Study.
    Species studied:
    Human
    Abstract:
    Congenital long QT syndrome (LQTS) is associated with high genetic and allelic heterogeneity. In some cases, more than one genetic variant is identified in the same (compound heterozygosity) or different (digenic heterozygosity) genes, and subjects with multiple pathogenic mutations may have a more severe disease. Standard-of-care clinical genetic testing for this and other arrhythmia susceptibility syndromes improves the identification of complex genotypes. Therefore, it is important to distinguish between pathogenic mutations and benign rare variants. We identified four genetic variants (KCNQ1-p.R583H, KCNH2-p.C108Y, KCNH2-p.K897T, and KCNE1-p.G38S) in an LQTS family. On the basis of in silico analysis, clinical data from our family, and the evidence from previous studies, we analyzed two mutated channels, KCNQ1-p.R583H and KCNH2-p.C108Y, using the whole-cell patch clamp technique. We found that KCNQ1-p.R583H was not associated with a severe functional impairment, whereas KCNH2-p.C108Y, a novel variant, encoded a non-functional channel that exerts dominant-negative effects on the wild-type. Notably, the common variants KCNH2-p.K897T and KCNE1-p.G38S were previously reported to produce more severe phenotypes when combined with disease-causing alleles. Our results indicate that the novel KCNH2-C108Y variant can be a pathogenic LQTS mutation, whereas KCNQ1-p.R583H, KCNH2-p.K897T, and KCNE1-p.G38S could be LQTS modifiers.
  • Gene:
    Genomic location:
    chr7:150645534
    dbSNP ID:
    Alias:
    KCNH2:p.Lys897Thr, KCNH2:p.K897T, KCNH2:K897T
    Target disease:
    Long QT Syndrome(DOID_2843)
    Effect type:
    Penetrance 
    Modifier effect:
    Altered incidence 
    Evidence:
    From review article 
    Effect:
    Protective effect
    Reference:
    Title:
    Identification of a KCNQ1 polymorphism acting as a protective modifier against arrhythmic risk in long-QT syndrome.
    Species studied:
    Human
    Abstract:
    Long-QT syndrome (LQTS) is characterized by such striking clinical heterogeneity that, even among family members carrying the same mutation, clinical outcome can range between sudden death and no symptoms. We investigated the role of genetic variants as modifiers of risk for cardiac events in patients with LQTS.
  • Gene:
    Genomic location:
    chr7:150645534
    dbSNP ID:
    Alias:
    KCNH2:p.Lys897Thr, KCNH2:p.K897T, KCNH2:K897T
    Target disease:
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    Patients with an acute MI carrying the KCNH2-K897T polymorphism had an 8-fold greater risk of experiencing TdP compared with controls (95% confidence interval = 2-40) 
    Effect:
    The common K897T polymorphism is associated with an increased risk of TdP developing in the subacute phase of MI
    Reference:
    Title:
    Torsades de pointes following acute myocardial infarction: evidence for a deadly link with a common genetic variant.
    Species studied:
    Human
    Abstract:
    Although QT prolongation following myocardial infarction (MI) is generally moderate, cases with marked QT prolongation leading to life-threatening torsades de pointes (TdP) have been described.
  • Gene:
    Genomic location:
    chr7:150648037
    dbSNP ID:
    Target disease:
    Long QT Syndrome(DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered density of expressed heterozygous KCNH2 channels 
    Evidence:
    Assessment of genotype–phenotype associations and gene activity study 
    Effect:
    The S706C (KCNH2) mutation was found to reduce the current density of expressed heterozygous KCNH2 channels with a positive shift (+8 mV) of the activation curve.
    Reference:
    Title:
    Additional gene variants reduce effectiveness of beta-blockers in the LQT1 form of long QT syndrome.
    Species studied:
    Human
    Abstract:
    Beta-blockers are widely used to prevent the lethal cardiac events associated with the long QT syndrome (LQTS), especially in KCNQ1-related LQTS (LQT1) patients. Some LQT1 patients, however, are refractory to this therapy.