The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29823:T->G |
2697049 |
NC_045512.2 |
29823 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.003‰ |
69
|
NC_045512.2:29823:T->A |
2697049 |
NC_045512.2 |
29823 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0003‰ |
9
|
NC_045512.2:29823:T->C |
2697049 |
NC_045512.2 |
29823 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.0005‰ |
12
|
NC_045512.2:29822:TTA->T |
2697049 |
NC_045512.2 |
29822 |
TTA |
T |
indel |
downstream |
|
|
|
|
Human |
France |
0‰ |
2
|
NC_045512.2:29822:TTAG->T |
2697049 |
NC_045512.2 |
29822 |
TTAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29822:T->A |
2697049 |
NC_045512.2 |
29822 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0004‰ |
11
|
NC_045512.2:29822:T->G |
2697049 |
NC_045512.2 |
29822 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0011‰ |
26
|
NC_045512.2:29822:TTAGTA->T |
2697049 |
NC_045512.2 |
29822 |
TTAGTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0004‰ |
10
|
NC_045512.2:29822:T->C |
2697049 |
NC_045512.2 |
29822 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
France |
0.0026‰ |
62
|
NC_045512.2:29821:TTTA->T |
2697049 |
NC_045512.2 |
29821 |
TTTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|
NC_045512.2:29821:T->TCGGCTGCATGC |
2697049 |
NC_045512.2 |
29821 |
T |
TCGGCTGCATGC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0008‰ |
20
|
NC_045512.2:29821:T->A |
2697049 |
NC_045512.2 |
29821 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0004‰ |
11
|
NC_045512.2:29821:T->G |
2697049 |
NC_045512.2 |
29821 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0002‰ |
6
|
NC_045512.2:29821:T->C |
2697049 |
NC_045512.2 |
29821 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0034‰ |
80
|
NC_045512.2:29820:TTTTAGTAGTGCTA->T |
2697049 |
NC_045512.2 |
29820 |
TTTTAGTAGTGCTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29820:T->G |
2697049 |
NC_045512.2 |
29820 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
4
|
NC_045512.2:29820:T->C |
2697049 |
NC_045512.2 |
29820 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0274‰ |
632
|
NC_045512.2:29820:T->A |
2697049 |
NC_045512.2 |
29820 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0001‰ |
4
|
NC_045512.2:29819:A->ATT |
2697049 |
NC_045512.2 |
29819 |
A |
ATT |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29819:A->C |
2697049 |
NC_045512.2 |
29819 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
2
|