The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29830:G->T |
2697049 |
NC_045512.2 |
29830 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0103‰ |
239
|
NC_045512.2:29830:G->C |
2697049 |
NC_045512.2 |
29830 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0002‰ |
6
|
NC_045512.2:29830:G->A |
2697049 |
NC_045512.2 |
29830 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Uganda |
0.0003‰ |
9
|
NC_045512.2:29829:T->G |
2697049 |
NC_045512.2 |
29829 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
NC_045512.2:29829:TG->T |
2697049 |
NC_045512.2 |
29829 |
TG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29829:TGCTATCCCCA->C |
2697049 |
NC_045512.2 |
29829 |
TGCTATCCCCA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0026‰ |
62
|
NC_045512.2:29829:TGCTATCCCCATG->T |
2697049 |
NC_045512.2 |
29829 |
TGCTATCCCCATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Romania |
0‰ |
2
|
NC_045512.2:29829:T->A |
2697049 |
NC_045512.2 |
29829 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0008‰ |
20
|
NC_045512.2:29829:TGC->T |
2697049 |
NC_045512.2 |
29829 |
TGC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0‰ |
1
|
NC_045512.2:29829:T->C |
2697049 |
NC_045512.2 |
29829 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Uganda |
0.0031‰ |
72
|
NC_045512.2:29828:G->GT |
2697049 |
NC_045512.2 |
29828 |
G |
GT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29828:G->GCTGTCACTCGGC |
2697049 |
NC_045512.2 |
29828 |
G |
GCTGTCACTCGGC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
2
|
NC_045512.2:29828:G->GC |
2697049 |
NC_045512.2 |
29828 |
G |
GC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0001‰ |
3
|
NC_045512.2:29828:G->C |
2697049 |
NC_045512.2 |
29828 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0‰ |
1
|
NC_045512.2:29828:GTGCT->G |
2697049 |
NC_045512.2 |
29828 |
GTGCT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Romania |
0.0001‰ |
4
|
NC_045512.2:29828:G->AT |
2697049 |
NC_045512.2 |
29828 |
G |
AT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Uganda |
0‰ |
1
|
NC_045512.2:29828:G->T |
2697049 |
NC_045512.2 |
29828 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0054‰ |
125
|
NC_045512.2:29828:G->A |
2697049 |
NC_045512.2 |
29828 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Uganda |
0.0011‰ |
26
|
NC_045512.2:29827:A->AG |
2697049 |
NC_045512.2 |
29827 |
A |
AG |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29827:AGTGCTAT->G |
2697049 |
NC_045512.2 |
29827 |
AGTGCTAT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0008‰ |
20
|