The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29827:A->T |
2697049 |
NC_045512.2 |
29827 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0075‰ |
173
|
NC_045512.2:29827:A->C |
2697049 |
NC_045512.2 |
29827 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.0002‰ |
5
|
NC_045512.2:29827:A->G |
2697049 |
NC_045512.2 |
29827 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Malaysia |
0.0059‰ |
136
|
NC_045512.2:29826:TA->T |
2697049 |
NC_045512.2 |
29826 |
TA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29826:TAGTGCTATC->T |
2697049 |
NC_045512.2 |
29826 |
TAGTGCTATC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
NC_045512.2:29826:T->TGGAA |
2697049 |
NC_045512.2 |
29826 |
T |
TGGAA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29826:T->A |
2697049 |
NC_045512.2 |
29826 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0001‰ |
3
|
NC_045512.2:29826:TAGTGCTATCCCCATG->T |
2697049 |
NC_045512.2 |
29826 |
TAGTGCTATCCCCATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0001‰ |
4
|
NC_045512.2:29826:T->G |
2697049 |
NC_045512.2 |
29826 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0002‰ |
5
|
NC_045512.2:29826:T->C |
2697049 |
NC_045512.2 |
29826 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0008‰ |
19
|
NC_045512.2:29825:G->GATTGCTATGTGAGAT |
2697049 |
NC_045512.2 |
29825 |
G |
GATTGCTATGTGAGAT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
NC_045512.2:29825:G->C |
2697049 |
NC_045512.2 |
29825 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Canada |
0.002‰ |
48
|
NC_045512.2:29825:G->GT |
2697049 |
NC_045512.2 |
29825 |
G |
GT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0005‰ |
12
|
NC_045512.2:29825:G->T |
2697049 |
NC_045512.2 |
29825 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,China,Malaysia |
0.0403‰ |
929
|
NC_045512.2:29825:G->A |
2697049 |
NC_045512.2 |
29825 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom,Russia |
0.0065‰ |
151
|
NC_045512.2:29824:A->T |
2697049 |
NC_045512.2 |
29824 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0031‰ |
73
|
NC_045512.2:29824:A->C |
2697049 |
NC_045512.2 |
29824 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
France |
0.0003‰ |
8
|
NC_045512.2:29824:A->G |
2697049 |
NC_045512.2 |
29824 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,China,United Kingdom |
0.0016‰ |
39
|
NC_045512.2:29823:TAGTAGTGCTATCCCCATG->T |
2697049 |
NC_045512.2 |
29823 |
TAGTAGTGCTATCCCCATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29823:TAGTA->T |
2697049 |
NC_045512.2 |
29823 |
TAGTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|