The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29798:G->C |
2697049 |
NC_045512.2 |
29798 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0006‰ |
14
|
NC_045512.2:29798:G->A |
2697049 |
NC_045512.2 |
29798 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Portugal |
0.0004‰ |
10
|
NC_045512.2:29797:A->C |
2697049 |
NC_045512.2 |
29797 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India,Spain |
0.004‰ |
92
|
NC_045512.2:29797:A->G |
2697049 |
NC_045512.2 |
29797 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0054‰ |
126
|
NC_045512.2:29797:A->T |
2697049 |
NC_045512.2 |
29797 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0003‰ |
7
|
NC_045512.2:29796:A->G |
2697049 |
NC_045512.2 |
29796 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.0004‰ |
10
|
NC_045512.2:29796:A->C |
2697049 |
NC_045512.2 |
29796 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0004‰ |
10
|
NC_045512.2:29795:GAAGAGCCCTAATGTGTAAA->G |
2697049 |
NC_045512.2 |
29795 |
GAAGAGCCCTAATGTGTAAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29795:G->T |
2697049 |
NC_045512.2 |
29795 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
3
|
NC_045512.2:29795:G->A |
2697049 |
NC_045512.2 |
29795 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0046‰ |
106
|
NC_045512.2:29795:G->C |
2697049 |
NC_045512.2 |
29795 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29794:G->T |
2697049 |
NC_045512.2 |
29794 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0006‰ |
15
|
NC_045512.2:29794:G->A |
2697049 |
NC_045512.2 |
29794 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0043‰ |
99
|
NC_045512.2:29794:G->C |
2697049 |
NC_045512.2 |
29794 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh |
0.0002‰ |
5
|
NC_045512.2:29793:TG->T |
2697049 |
NC_045512.2 |
29793 |
TG |
T |
indel |
downstream |
|
|
|
|
Human |
Bulgaria |
0.0003‰ |
9
|
NC_045512.2:29793:TGGAAG->T |
2697049 |
NC_045512.2 |
29793 |
TGGAAG |
T |
indel |
downstream |
|
|
|
|
Human |
Italy |
0‰ |
1
|
NC_045512.2:29793:T->G |
2697049 |
NC_045512.2 |
29793 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0004‰ |
11
|
NC_045512.2:29793:T->C |
2697049 |
NC_045512.2 |
29793 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Scotland,Australia |
0.0033‰ |
77
|
NC_045512.2:29793:T->A |
2697049 |
NC_045512.2 |
29793 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.0019‰ |
44
|
NC_045512.2:29792:AT->A |
2697049 |
NC_045512.2 |
29792 |
AT |
A |
indel |
downstream |
|
|
|
|
Human |
Bulgaria |
0‰ |
1
|