The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29792:A->C |
2697049 |
NC_045512.2 |
29792 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0033‰ |
78
|
NC_045512.2:29792:A->T |
2697049 |
NC_045512.2 |
29792 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0008‰ |
19
|
NC_045512.2:29792:ATGGAAGAGCCCTAATG->A |
2697049 |
NC_045512.2 |
29792 |
ATGGAAGAGCCCTAATG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29792:A->G |
2697049 |
NC_045512.2 |
29792 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Russia |
0.0007‰ |
18
|
NC_045512.2:29791:T->G |
2697049 |
NC_045512.2 |
29791 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
2
|
NC_045512.2:29791:T->A |
2697049 |
NC_045512.2 |
29791 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Iraq |
0‰ |
1
|
NC_045512.2:29791:T->C |
2697049 |
NC_045512.2 |
29791 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom,Thailand |
0.0307‰ |
708
|
NC_045512.2:29790:ATAT->A |
2697049 |
NC_045512.2 |
29790 |
ATAT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|
NC_045512.2:29790:A->ATCGTTC |
2697049 |
NC_045512.2 |
29790 |
A |
ATCGTTC |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0038‰ |
89
|
NC_045512.2:29790:A->G |
2697049 |
NC_045512.2 |
29790 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0006‰ |
15
|
NC_045512.2:29790:A->T |
2697049 |
NC_045512.2 |
29790 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Israel |
0.0003‰ |
9
|
NC_045512.2:29790:A->C |
2697049 |
NC_045512.2 |
29790 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.0004‰ |
10
|
NC_045512.2:29789:TA->T |
2697049 |
NC_045512.2 |
29789 |
TA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29789:T->C |
2697049 |
NC_045512.2 |
29789 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0013‰ |
31
|
NC_045512.2:29789:T->A |
2697049 |
NC_045512.2 |
29789 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.005‰ |
116
|
NC_045512.2:29789:T->G |
2697049 |
NC_045512.2 |
29789 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.001‰ |
23
|
NC_045512.2:29788:C->A |
2697049 |
NC_045512.2 |
29788 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Singapore |
0.0003‰ |
9
|
NC_045512.2:29788:CTA->C |
2697049 |
NC_045512.2 |
29788 |
CTA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0023‰ |
55
|
NC_045512.2:29788:C->T |
2697049 |
NC_045512.2 |
29788 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Russia |
0.0005‰ |
13
|
NC_045512.2:29787:C->A |
2697049 |
NC_045512.2 |
29787 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0.0002‰ |
6
|