The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29748:TAC->T |
2697049 |
NC_045512.2 |
29748 |
TAC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29748:TACGATCGAGTGTACAGTGAAC->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTGTACAGTGAAC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0001‰ |
3
|
NC_045512.2:29748:TA->T |
2697049 |
NC_045512.2 |
29748 |
TA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Luxembourg |
0‰ |
1
|
NC_045512.2:29748:TACGATCGAGTGTAC->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTGTAC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29748:TACGATCGAGTG->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0009‰ |
23
|
NC_045512.2:29748:TACG->T |
2697049 |
NC_045512.2 |
29748 |
TACG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Switzerland |
0.0013‰ |
30
|
NC_045512.2:29748:TACGATCGAGTGTA->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTGTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
4
|
NC_045512.2:29748:TACGATCGAGTGTACAGTG->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTGTACAGTG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0003‰ |
9
|
NC_045512.2:29748:TACGATCGAGTGTACAGTGAACAATG->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTGTACAGTGAACAATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Ireland |
0.0002‰ |
5
|
NC_045512.2:29748:TACGATCGAGTGTACAGTGAACA->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTGTACAGTGAACA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0003‰ |
9
|
NC_045512.2:29748:T->A |
2697049 |
NC_045512.2 |
29748 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0004‰ |
10
|
NC_045512.2:29748:T->G |
2697049 |
NC_045512.2 |
29748 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0003‰ |
8
|
NC_045512.2:29748:TACGATCG->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.004‰ |
93
|
NC_045512.2:29748:TACGATC->T |
2697049 |
NC_045512.2 |
29748 |
TACGATC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0002‰ |
5
|
NC_045512.2:29748:T->C |
2697049 |
NC_045512.2 |
29748 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0033‰ |
76
|
NC_045512.2:29748:TACGATCGAGTGTACAGTGA->T |
2697049 |
NC_045512.2 |
29748 |
TACGATCGAGTGTACAGTGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0007‰ |
18
|
NC_045512.2:29747:GTACGATCGAGT->G |
2697049 |
NC_045512.2 |
29747 |
GTACGATCGAGT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29747:GTACGATCGA->G |
2697049 |
NC_045512.2 |
29747 |
GTACGATCGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29747:GTACGATCGAGTGTACAGTGAACAAT->G |
2697049 |
NC_045512.2 |
29747 |
GTACGATCGAGTGTACAGTGAACAAT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Canada |
0.0004‰ |
11
|
NC_045512.2:29747:GTACGAT->G |
2697049 |
NC_045512.2 |
29747 |
GTACGAT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
3
|