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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV142519 Concensus Bat coronavirus RNA virus Bat coronavirus RaTG13 2020-03-28 Rhinolophus affinis 2020-03-28 2709072 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae ViGTK Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences 320 Yueyang Road, Shanghai, China, 200031 Yunchao Ling, Zhen Wang, Ruifang Cao, Guoqing Zhang Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences
OEAV142521 Concensus Bat and Pangolin coronavirus RNA virus Severe acute respiratory syndrome coronavirus 2 2020-03-28 Rhinolophus affinis 2020-03-28 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae ViGTK Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences 320 Yueyang Road, Shanghai, China, 200031 Yunchao Ling, Zhen Wang, Ruifang Cao, Guoqing Zhang Bio-Med Big Data Center, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences
OEAV013420 Bat coronavirus RaTG13 MN996532 RNA viruses Bat coronavirus RaTG13 China 2013-07-24 Rhinolophus affinis 29855 2020-01-29 feces 2709072 Bat coronavirus RaTG13 Coronaviridae NCBI Virus/Genbank Zhu,Y., Yu,P., Li,B., Hu,B., Si,H.R., Yang,X.L., Zhou,P. and Shi,Z.L. CAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences 29855 100.00
OEAV000272 hCoV-19/bat/Yunnan/RaTG13/2013 EPI_ISL_402131 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2013-07-24 Rhinolophus affinis 29855 2020-01-24 Fecal swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Wuhan Institute of Virology, Chinese Academy of Sciences 44 Xiao Hong Shan, Wuhan, Hubei 430071 Yan Zhu, Ping Yu, Bei Li, Ben Hu, Hao-Rui Si, Xing-Lou Yang, Peng Zhou, Zheng-Li Shi Wuhan Institute of Virology, Chinese Academy of Sciences 29855 100.00
OEAV115990 Rhinolophus affinis bat coronavirus HKU2-related isolate 160660 MN611522 RNA viruses Rhinolophus affinis bat coronavirus HKU2-related China 2018-03-01 Rhinolophus affinis 26956 2019-12-31 2691595 Rhinolophus affinis bat coronavirus HKU2-related Alphacoronavirus Coronaviridae NCBI Virus/Genbank Li,B., Si,H.R., Zhu,Y., Yang,X.L., Anderson,D.E., Shi,Z.L., Wang,L.F. and Zhou,P. CAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences 26956 100.00
OEAV025693 Coronavirus BtRs-BetaCoV/YN2018A MK211375 RNA viruses Coronavirus BtRs-BetaCoV/YN2018A China 2016-09-01 Rhinolophus affinis 29698 2019-06-30 2591234 Coronavirus BtRs-BetaCoV/YN2018A Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 29698 100.00
OEAV025694 Coronavirus BtRs-BetaCoV/YN2018B MK211376 RNA viruses Coronavirus BtRs-BetaCoV/YN2018B China 2016-09-01 Rhinolophus affinis 30256 2019-06-30 2591235 Coronavirus BtRs-BetaCoV/YN2018B Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 30256 100.00
OEAV025695 Coronavirus BtRs-BetaCoV/YN2018C MK211377 RNA viruses Coronavirus BtRs-BetaCoV/YN2018C China 2016-09-01 Rhinolophus affinis 29689 2019-06-30 2591236 Coronavirus BtRs-BetaCoV/YN2018C Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 29689 100.00
OEAV025696 Coronavirus BtRs-BetaCoV/YN2018D MK211378 RNA viruses Coronavirus BtRs-BetaCoV/YN2018D China 2016-09-01 Rhinolophus affinis 30213 2019-06-30 2591237 Coronavirus BtRs-BetaCoV/YN2018D Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 30213 100.00
OEAV025697 Coronavirus BtRt-BetaCoV/GX2018 MK211379 RNA viruses Coronavirus BtRt-BetaCoV/GX2018 China 2016-09-01 Rhinolophus affinis 29752 2019-06-30 2591238 Coronavirus BtRt-BetaCoV/GX2018 Betacoronavirus Coronaviridae NCBI Virus/Genbank Han,Y. and Wu,Z. MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College 29748 99.99
OEAV115993 Rhinolophus affinis polyomavirus 1 PyV22-DXC12 DNA LC426701 DNA viruses Rhinolophus affinis polyomavirus 1 China 2016-01-01 Rhinolophus affinis 5097 2019-05-31 2447809 Rhinolophus affinis polyomavirus 1 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5097 100.00
OEAV115994 Rhinolophus affinis polyomavirus 1 PyVB-FN02C DNA LC426678 DNA viruses Rhinolophus affinis polyomavirus 1 China 2016-01-01 Rhinolophus affinis 5097 2019-05-31 2447809 Rhinolophus affinis polyomavirus 1 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5097 100.00
OEAV115995 Rhinolophus affinis polyomavirus 1 PyVB-FN04C DNA LC426679 DNA viruses Rhinolophus affinis polyomavirus 1 China 2016-01-01 Rhinolophus affinis 5097 2019-05-31 2447809 Rhinolophus affinis polyomavirus 1 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5097 100.00
OEAV115996 Rhinolophus affinis polyomavirus 2 PyVC-FN15C DNA LC426680 DNA viruses Rhinolophus affinis polyomavirus 2 China 2016-01-01 Rhinolophus affinis 5224 2019-05-31 2447810 Rhinolophus affinis polyomavirus 2 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5224 100.00
OEAV115997 Rhinolophus affinis polyomavirus 3 PyV19-DXC32 DNA LC426681 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5033 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5033 100.00
OEAV115998 Rhinolophus affinis polyomavirus 3 PyV19-FCC38 DNA LC426682 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5033 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5033 100.00
OEAV115999 Rhinolophus affinis polyomavirus 3 PyV19-SWAC9 DNA LC426683 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5032 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5032 100.00
OEAV116000 Rhinolophus affinis polyomavirus 3 PyV19-XDAC25 DNA LC426684 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5032 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5032 100.00
OEAV116001 Rhinolophus affinis polyomavirus 3 PyV19-XDAC40 DNA LC426685 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5032 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5032 100.00
OEAV116002 Rhinolophus affinis polyomavirus 3 PyVA-FN01C DNA LC426686 DNA viruses Rhinolophus affinis polyomavirus 3 China 2016-01-01 Rhinolophus affinis 5032 2019-05-31 2447811 Rhinolophus affinis polyomavirus 3 Polyomaviridae NCBI Virus/Genbank Gonzalez,G. and Tan,Z. Contact:Gabriel Gonzalez Research Center for Zoonosis Control, Hokkaido University, Division of Bioinformatics 5032 100.00
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