Introduction for iMAC

iMAC is an integrated microbiome analysis cloud platform designed for systematically and comprehensively analyzing the raw data (.fastq/.sra) of 16S rRNA amplicon and metagenome.

BIO-MED BIG DATA CENTER are responsible for releasing and updating standard and automatic pipelines, such as 16S rRNA pipeline, mWGS-reads pipeline, mWGS-MAG pipeline and mWGS-assembly pipeline. Besides, the iMAC will also include advanced tools for further analysis.

iMAC is a publicly free and friendly platform. Users just need to upload data, select the interested pipeline and optionally adjust the default parameters, then a task will be automatically submitted and processed in cloud. Therefore, iMAC provides interactive graphics as well as a detailed PDF report.

Pipeline

16S

Support projects

Project: MASH-LAKE
Sample NO: 4238
Total Sequence Size: 67.56 Tb

If you would like to know more about this project ,please click here hadal

16S rRNA analysis pipeline:

Based on Qiime2. Mainly includes species diversity study (alpha / beta diversity), differential flora study and differential function study.

mWGS-reads

Support projects

Project: MASH-OCEAN
Sample NO: 14297
Total Sequence Size: 204.2 Tb

If you would like to know more about this project ,please click here hadal

mWGS-reads:

Based on reads mapping method. Mainly studies the entire microbial community in a specific environment, include analyzes the species taxonomy, community function and metabolism.

mWGS-MAG

Support projects

Project: MASH-China Sea
Sample NO: 1482
Total Sequence Size: 53.34 Tb

If you would like to know more about this project ,please click here MESH

mWGS-MAG:

Based on metagenome-assembled genome method. Mainly includes assemble reads as contigs, obtain high quality bins and predict protein-coding genes.

Annotation Tools

Data Distribution Area

Submit Data