iMAC is an integrated microbiome analysis cloud platform designed for systematically and comprehensively analyzing the raw data (.fastq/.sra) of 16S rRNA amplicon and metagenome.
BIO-MED BIG DATA CENTER are responsible for releasing and updating standard and automatic pipelines, such as 16S rRNA pipeline, mWGS-reads pipeline, mWGS-MAG pipeline and mWGS-assembled pipeline. Besides, the iMAC will also include advanced tools for further analyzes.
iMAC is a publicly free and friendly platform. Users just need to upload data, select the interested pipeline and optionally adjust the default parameters, then a task will be automatically submitted and processed in cloud. Therefore, iMAC provides interactive graphics as well as a detailed PDF report.
If you would like to know more about this project ,please click here hadal
Based on Qiime2. Mainly includes species diversity study (alpha / beta diversity), differential flora study and differential function study.
If you would like to know more about this project ,please click here hadal
Based on reads mapping method. Mainly studies the entire microbial community in a specific environment, include analyzes the species taxonomy, community function and metabolism.
If you would like to know more about this project ,please click here MESH
Based on metagenome-assembled genome method. Mainly includes assemble reads as contigs, obtain high quality bins and predict protein-coding genes.