The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29850:A->G |
2697049 |
NC_045512.2 |
29850 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia |
0.0015‰ |
36
|
NC_045512.2:29849:A->AAAGGTTT |
2697049 |
NC_045512.2 |
29849 |
A |
AAAGGTTT |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
2
|
NC_045512.2:29849:A->AGTGCACT |
2697049 |
NC_045512.2 |
29849 |
A |
AGTGCACT |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29849:A->T |
2697049 |
NC_045512.2 |
29849 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0013‰ |
31
|
NC_045512.2:29849:A->C |
2697049 |
NC_045512.2 |
29849 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,Chile |
0.0009‰ |
22
|
NC_045512.2:29849:A->G |
2697049 |
NC_045512.2 |
29849 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,China,Peru |
0.0045‰ |
104
|
NC_045512.2:29848:TAATAGCTTCTTAGGAGAATG->T |
2697049 |
NC_045512.2 |
29848 |
TAATAGCTTCTTAGGAGAATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29848:TAA->T |
2697049 |
NC_045512.2 |
29848 |
TAA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Malaysia |
0‰ |
1
|
NC_045512.2:29848:TAA->T |
2697049 |
NC_045512.2 |
29848 |
TAA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Malaysia |
0‰ |
1
|
NC_045512.2:29848:T->TCTTGTA |
2697049 |
NC_045512.2 |
29848 |
T |
TCTTGTA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29848:TAATAG->T |
2697049 |
NC_045512.2 |
29848 |
TAATAG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Slovenia |
0.0002‰ |
6
|
NC_045512.2:29848:T->TA |
2697049 |
NC_045512.2 |
29848 |
T |
TA |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
1
|
NC_045512.2:29848:T->G |
2697049 |
NC_045512.2 |
29848 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.003‰ |
70
|
NC_045512.2:29848:T->A |
2697049 |
NC_045512.2 |
29848 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,
Belgium,
China,
Chile,
Spain,
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|
0.0059‰ |
137
|
NC_045512.2:29848:T->C |
2697049 |
NC_045512.2 |
29848 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.0006‰ |
15
|
NC_045512.2:29847:TTAATA->T |
2697049 |
NC_045512.2 |
29847 |
TTAATA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Colombia |
0‰ |
1
|
NC_045512.2:29847:TTAATAGCTTCTTAGGAGA->T |
2697049 |
NC_045512.2 |
29847 |
TTAATAGCTTCTTAGGAGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29847:TTAATAGCTTCTTAGGA->T |
2697049 |
NC_045512.2 |
29847 |
TTAATAGCTTCTTAGGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29847:TTA->C |
2697049 |
NC_045512.2 |
29847 |
TTA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Romania |
0‰ |
2
|
NC_045512.2:29847:T->A |
2697049 |
NC_045512.2 |
29847 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0.0002‰ |
5
|