The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29847:T->TA |
2697049 |
NC_045512.2 |
29847 |
T |
TA |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29847:T->C |
2697049 |
NC_045512.2 |
29847 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0.0031‰ |
72
|
NC_045512.2:29847:T->G |
2697049 |
NC_045512.2 |
29847 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Peru |
0.0011‰ |
26
|
NC_045512.2:29846:TTTAATAGCTTCTTAGGAGAATGA->T |
2697049 |
NC_045512.2 |
29846 |
TTTAATAGCTTCTTAGGAGAATGA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29846:TTTAATAGCTTCTTAGGAGAATGAC->T |
2697049 |
NC_045512.2 |
29846 |
TTTAATAGCTTCTTAGGAGAATGAC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Belgium |
0‰ |
1
|
NC_045512.2:29846:T->TTC |
2697049 |
NC_045512.2 |
29846 |
T |
TTC |
indel |
downstream |
|
|
|
|
Homo sapiens |
North Macedonia |
0‰ |
1
|
NC_045512.2:29846:TTTA->T |
2697049 |
NC_045512.2 |
29846 |
TTTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Japan |
0‰ |
1
|
NC_045512.2:29846:T->TGCATGCTTAGTGCACTGG |
2697049 |
NC_045512.2 |
29846 |
T |
TGCATGCTTAGTGCACTGG |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0‰ |
2
|
NC_045512.2:29846:T->A |
2697049 |
NC_045512.2 |
29846 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Denmark,Chile |
0.0006‰ |
14
|
NC_045512.2:29846:T->C |
2697049 |
NC_045512.2 |
29846 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0.0009‰ |
22
|
NC_045512.2:29846:T->G |
2697049 |
NC_045512.2 |
29846 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0012‰ |
29
|
NC_045512.2:29845:TTTTAATAGCTTCTTAGGAGAATG->T |
2697049 |
NC_045512.2 |
29845 |
TTTTAATAGCTTCTTAGGAGAATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29845:T->A |
2697049 |
NC_045512.2 |
29845 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Denmark |
0.001‰ |
23
|
NC_045512.2:29845:T->C |
2697049 |
NC_045512.2 |
29845 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,United States,Chile |
0.0039‰ |
90
|
NC_045512.2:29845:T->G |
2697049 |
NC_045512.2 |
29845 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0014‰ |
33
|
NC_045512.2:29844:A->AACCCCCGGGTTCAAGCGATTCTC |
2697049 |
NC_045512.2 |
29844 |
A |
AACCCCCGGGTTCAAGCGATTCTC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Egypt |
0‰ |
1
|
NC_045512.2:29844:ATTTTAATAGCTTCTTAG->A |
2697049 |
NC_045512.2 |
29844 |
ATTTTAATAGCTTCTTAG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29844:ATTTTAATAG->A |
2697049 |
NC_045512.2 |
29844 |
ATTTTAATAG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
1
|
NC_045512.2:29844:ATTTTAATAGCTTCTTAGGAGAAT->A |
2697049 |
NC_045512.2 |
29844 |
ATTTTAATAGCTTCTTAGGAGAAT |
A |
indel |
downstream |
|
|
|
|
Human |
Italy |
0‰ |
1
|
NC_045512.2:29844:A->AT |
2697049 |
NC_045512.2 |
29844 |
A |
AT |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|