The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29844:ATTTTAATAGCTTCTTAGGAGAATGAC->A |
2697049 |
NC_045512.2 |
29844 |
ATTTTAATAGCTTCTTAGGAGAATGAC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
1
|
NC_045512.2:29844:A->T |
2697049 |
NC_045512.2 |
29844 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.0007‰ |
18
|
NC_045512.2:29844:A->G |
2697049 |
NC_045512.2 |
29844 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Saudi Arabia,United States,China |
0.0017‰ |
41
|
NC_045512.2:29844:A->C |
2697049 |
NC_045512.2 |
29844 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0011‰ |
26
|
NC_045512.2:29844:AT->A |
2697049 |
NC_045512.2 |
29844 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,Uganda |
0.0004‰ |
10
|
NC_045512.2:29843:GA->G |
2697049 |
NC_045512.2 |
29843 |
GA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0001‰ |
4
|
NC_045512.2:29843:G->GTTGACGCATACAA |
2697049 |
NC_045512.2 |
29843 |
G |
GTTGACGCATACAA |
indel |
downstream |
|
|
|
|
Homo sapiens |
Croatia |
0‰ |
1
|
NC_045512.2:29843:G->GC |
2697049 |
NC_045512.2 |
29843 |
G |
GC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
NC_045512.2:29843:G->GAAAAACACAGTCTGTACCGTCTGCGGT |
2697049 |
NC_045512.2 |
29843 |
G |
GAAAAACACAGTCTGTACCGTCTGCGGT |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29843:G->T |
2697049 |
NC_045512.2 |
29843 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.001‰ |
24
|
NC_045512.2:29843:G->A |
2697049 |
NC_045512.2 |
29843 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Denmark,Chile |
0.0027‰ |
63
|
NC_045512.2:29843:G->C |
2697049 |
NC_045512.2 |
29843 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Bangladesh,Chile |
0.0035‰ |
82
|
NC_045512.2:29843:G->ATC |
2697049 |
NC_045512.2 |
29843 |
G |
ATC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|
NC_045512.2:29842:T->G |
2697049 |
NC_045512.2 |
29842 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0003‰ |
8
|
NC_045512.2:29842:T->A |
2697049 |
NC_045512.2 |
29842 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.001‰ |
25
|
NC_045512.2:29842:T->TC |
2697049 |
NC_045512.2 |
29842 |
T |
TC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0‰ |
1
|
NC_045512.2:29842:T->C |
2697049 |
NC_045512.2 |
29842 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.001‰ |
23
|
NC_045512.2:29842:TGATTTTAATAGCTTCTTAGGAGAATG->T |
2697049 |
NC_045512.2 |
29842 |
TGATTTTAATAGCTTCTTAGGAGAATG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|
NC_045512.2:29841:G->GT |
2697049 |
NC_045512.2 |
29841 |
G |
GT |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29841:GTGATTTTAATAGCTTCT->G |
2697049 |
NC_045512.2 |
29841 |
GTGATTTTAATAGCTTCT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0‰ |
1
|