The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29841:G->T |
2697049 |
NC_045512.2 |
29841 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Spain |
0.004‰ |
92
|
NC_045512.2:29841:G->A |
2697049 |
NC_045512.2 |
29841 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,United Kingdom,Chile |
0.0007‰ |
18
|
NC_045512.2:29841:G->C |
2697049 |
NC_045512.2 |
29841 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Chile |
0.0008‰ |
20
|
NC_045512.2:29840:T->TTGTGG |
2697049 |
NC_045512.2 |
29840 |
T |
TTGTGG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0‰ |
1
|
NC_045512.2:29840:TG->T |
2697049 |
NC_045512.2 |
29840 |
TG |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0.0001‰ |
3
|
NC_045512.2:29840:T->TC |
2697049 |
NC_045512.2 |
29840 |
T |
TC |
indel |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0‰ |
1
|
NC_045512.2:29840:T->G |
2697049 |
NC_045512.2 |
29840 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.0003‰ |
7
|
NC_045512.2:29840:T->A |
2697049 |
NC_045512.2 |
29840 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0007‰ |
18
|
NC_045512.2:29840:T->C |
2697049 |
NC_045512.2 |
29840 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,Spain |
0.0037‰ |
87
|
NC_045512.2:29839:A->AG |
2697049 |
NC_045512.2 |
29839 |
A |
AG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Belgium |
0‰ |
1
|
NC_045512.2:29839:AT->A |
2697049 |
NC_045512.2 |
29839 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29839:A->T |
2697049 |
NC_045512.2 |
29839 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.001‰ |
24
|
NC_045512.2:29839:A->G |
2697049 |
NC_045512.2 |
29839 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China,Chile |
0.0032‰ |
75
|
NC_045512.2:29839:A->C |
2697049 |
NC_045512.2 |
29839 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.0007‰ |
17
|
NC_045512.2:29839:A->AC |
2697049 |
NC_045512.2 |
29839 |
A |
AC |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0001‰ |
3
|
NC_045512.2:29839:ATGTGATTTTAAT->A |
2697049 |
NC_045512.2 |
29839 |
ATGTGATTTTAAT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0‰ |
1
|
NC_045512.2:29838:CATGTG->C |
2697049 |
NC_045512.2 |
29838 |
CATGTG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29838:CA->C |
2697049 |
NC_045512.2 |
29838 |
CA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29838:CATG->C |
2697049 |
NC_045512.2 |
29838 |
CATG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Slovenia |
0‰ |
1
|
NC_045512.2:29838:C->G |
2697049 |
NC_045512.2 |
29838 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0004‰ |
11
|