The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29834:T->TGTGAGATTAAAGTTAA |
2697049 |
NC_045512.2 |
29834 |
T |
TGTGAGATTAAAGTTAA |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0002‰ |
6
|
NC_045512.2:29834:TC->T |
2697049 |
NC_045512.2 |
29834 |
TC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0021‰ |
49
|
NC_045512.2:29834:T->G |
2697049 |
NC_045512.2 |
29834 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Belgium |
0.0003‰ |
9
|
NC_045512.2:29834:T->A |
2697049 |
NC_045512.2 |
29834 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0811‰ |
1866
|
NC_045512.2:29834:T->C |
2697049 |
NC_045512.2 |
29834 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom,Chile |
0.0052‰ |
121
|
NC_045512.2:29834:T->TGTGAGATTAAAAGTTAA |
2697049 |
NC_045512.2 |
29834 |
T |
TGTGAGATTAAAAGTTAA |
indel |
downstream |
|
|
|
|
Homo sapiens |
China |
0‰ |
2
|
NC_045512.2:29833:AT->A |
2697049 |
NC_045512.2 |
29833 |
AT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Brazil |
0‰ |
1
|
NC_045512.2:29833:A->C |
2697049 |
NC_045512.2 |
29833 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.001‰ |
23
|
NC_045512.2:29833:A->T |
2697049 |
NC_045512.2 |
29833 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Ecuador |
0.0005‰ |
13
|
NC_045512.2:29833:A->G |
2697049 |
NC_045512.2 |
29833 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
China |
0.0078‰ |
181
|
NC_045512.2:29832:T->TCACTGTACACTCGATCGTACTCCGCGTG |
2697049 |
NC_045512.2 |
29832 |
T |
TCACTGTACACTCGATCGTACTCCGCGTG |
indel |
downstream |
|
|
|
|
Homo sapiens |
Italy |
0‰ |
2
|
NC_045512.2:29832:TATCC->T |
2697049 |
NC_045512.2 |
29832 |
TATCC |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
NC_045512.2:29832:T->G |
2697049 |
NC_045512.2 |
29832 |
T |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0001‰ |
4
|
NC_045512.2:29832:T->C |
2697049 |
NC_045512.2 |
29832 |
T |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Oman |
0.0036‰ |
85
|
NC_045512.2:29832:T->A |
2697049 |
NC_045512.2 |
29832 |
T |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0019‰ |
44
|
NC_045512.2:29832:TATCCCCATGTGATTTTA->T |
2697049 |
NC_045512.2 |
29832 |
TATCCCCATGTGATTTTA |
T |
indel |
downstream |
|
|
|
|
Homo sapiens |
Russia |
0‰ |
1
|
NC_045512.2:29831:C->G |
2697049 |
NC_045512.2 |
29831 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Romania |
0‰ |
2
|
NC_045512.2:29831:C->T |
2697049 |
NC_045512.2 |
29831 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom,Switzerland |
0.0137‰ |
317
|
NC_045512.2:29831:C->A |
2697049 |
NC_045512.2 |
29831 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Chile |
0.0011‰ |
26
|
NC_045512.2:29830:GCTATCCCCATGTGATTTT->G |
2697049 |
NC_045512.2 |
29830 |
GCTATCCCCATGTGATTTT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Bosnia and Herzegovina |
0‰ |
1
|