Catalytic bioparts list
  Biopart ID Protein name Gene name Organism NCBI taxonomy ID EC number NT seq ID Protein ID Reactions Reaction ID Pathways Pathways ID Compound Compound ID pH ºC Chassis Evidence Xref
  OENC40436
D-ornithine 4,5-aminomutase
-
Acetoanaerobium sticklandii DSM 519
1511
5.4.3.5
OENC40436.n.1
OENC40436.p
D-ornithine = (2R,4S)-2,4-diaminopentanoate
OENA8183
-
-
D-ornithine
CHEBI:57668
8.5
20.0
Escherichia coli strain XL 1-Blue
experimental evidence
E3PY95
  OENC40438
D-ornithine 4,5-aminomutase
-
Acetoanaerobium sticklandii DSM 519
1511
5.4.3.5
OENC40438.n.1
OENC40438.p
D-ornithine = (2R,4S)-2,4-diaminopentanoate
OENA8183
-
-
D-ornithine
CHEBI:57668
8.5
20.0
Escherichia coli strain XL 1-Blue
experimental evidence
E3PY96
  OENC40471
2'-5' oligoadenylate synthase
-
Sus scrofa
9823
2.7.7.84
OENC40471.n.1
OENC40471.p
3 ATP = 5'-triphosphoadenylyl-(2'->5')-adenylyl-(2'->5')-adenosine + 2 diphosphate
OENA7430
-
-
ATP
CHEBI:30616
-
-
Escherichia coli strain BL21(DE3)
experimental evidence
Q29599
  OENC41451
Ornithine cyclodeaminase
-
Pseudomonas putida KT2440
2287
4.3.1.12
OENC41451.n.1
OENC41451.p
L-ornithine = L-proline + NH4(+)
OENA2527
Amino-acid biosynthesis; L-proline biosynthesis; L-proline from L-ornithine: step 1/1.
-
L-ornithine
CHEBI:46911
-
-
ornithine overproducing platform strain
experimental evidence
Q88H32
  OENC41474
carnitine O-octanoyltransferase
-
Homo sapiens
9606
2.3.1.137
OENC41474.n.1
OENC41474.p
(R)-carnitine + octanoyl-CoA = CoA + O-octanoyl-(R)-carnitine
OENA8191
-
-
(R)-carnitine
CHEBI:16347
-
-
HepG2 cell
experimental evidence
Q9UKG9
  OENC41484
Diglucosylglycerate octanoyltransferase
-
Mycolicibacterium hassiacum DSM 44199
46351
2.3.1.273
OENC41484.n.1
OENC41484.p
(2R)-2-O-[alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate + octanoyl-CoA = (2R)-2-O-[6-O-octanoyl-alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate + CoA
OENA8193
-
-
(2R)-2-O-[alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate
CHEBI:141056
7.0 - 8.5
45.0
Escherichia coli
experimental evidence
K5BJH8
  OENC41485
Diglucosylglycerate octanoyltransferase
-
Mycolicibacterium smegmatis MC2 155
1772
2.3.1.273
OENC41485.n.1
OENC41485.p
(2R)-2-O-[alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate + octanoyl-CoA = (2R)-2-O-[6-O-octanoyl-alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate + CoA
OENA8193
-
-
(2R)-2-O-[alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate
CHEBI:141056
7.0 - 8.5
-
Escherichia coli
experimental evidence
A0R109
  OENC41486
Diglucosylglycerate octanoyltransferase
-
Mycobacterium tuberculosis H37Rv
1773
2.3.1.273
OENC41486.n.1
OENC41486.p
(2R)-2-O-[alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate + octanoyl-CoA = (2R)-2-O-[6-O-octanoyl-alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate + CoA
OENA8193
-
-
(2R)-2-O-[alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-glycerate
CHEBI:141056
-
-
Escherichia coli
experimental evidence
P71725
  OENC41549
staphylopine dehydrogenase
-
Staphylococcus aureus subsp. aureus Mu50
1280
1.5.1.52
OENC41549.n.1
OENC41549.p
(2S)-2-amino-4-{[(1R)-1-carboxy-2-(1H-imidazol-4-yl)ethyl]amino}butanoate + H(+) + NADPH + pyruvate => H2O + NADP(+) + staphylopine
OENA8202
-
-
staphylopine
CHEBI:141669
8.0
22.0
Escherichia coli
experimental evidence
A0A0H3JT80
  OENC41870
pyruvate dehydrogenase (acetyl-transferring)
-
Homo sapiens
9606
1.2.4.1
OENC41870.n.1
OENC41870.p
[dihydrolipoyllysine-residue acetyltransferase]-(R)-N(6)-lipoyl-L-lysine + H(+) + pyruvate = [dihydrolipoyllysine-residue acetyltransferase]-(R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysine + CO2
OENA8207
-
-
[dihydrolipoyllysine-residue acetyltransferase]-(R)-N(6)-lipoyl-L-lysine
GENERIC:10480
-
-
Escherichia coli M15 cells
experimental evidence
P08559
  OENC41999
2-oxoacid oxidoreductase (ferredoxin)
-
Sulfurisphaera tokodaii str. 7
111955
1.2.7.11
OENC41999.n.1
OENC41999.p
a 2-oxocarboxylate + CoA + 2 oxidized [2Fe-2S]-[ferredoxin] = an acyl-CoA + CO2 + H(+) + 2 reduced [2Fe-2S]-[ferredoxin]
OENA8210
-
-
a 2-oxocarboxylate
CHEBI:35179
8.5
80.0
Escherichia coli (DE3)
experimental evidence
Q96Y66
  OENC42001
2-oxoacid oxidoreductase (ferredoxin)
-
Sulfurisphaera tokodaii str. 7
111955
1.2.7.11
OENC42001.n.1
OENC42001.p
a 2-oxocarboxylate + CoA + 2 oxidized [2Fe-2S]-[ferredoxin] = an acyl-CoA + CO2 + H(+) + 2 reduced [2Fe-2S]-[ferredoxin]
OENA8210
-
-
a 2-oxocarboxylate
CHEBI:35179
8.5
80.0
Escherichia coli (DE3)
experimental evidence
Q96XT2
  OENC42004
pyruvate synthase
-
Aeropyrum pernix K1
56636
1.2.7.11
-
OENC42004.p
a 2-oxocarboxylate + CoA + 2 oxidized [2Fe-2S]-[ferredoxin] = an acyl-CoA + CO2 + H(+) + 2 reduced [2Fe-2S]-[ferredoxin]
OENA8210
-
-
a 2-oxocarboxylate
CHEBI:35179
8.0
105.0
Escherichia coli
experimental evidence
Q9YA11
  OENC42005
2-oxoacid oxidoreductase (ferredoxin)
-
Sulfurisphaera tokodaii str. 7
111955
1.2.7.11
OENC42005.n.1
OENC42005.p
a 2-oxocarboxylate + CoA + 2 oxidized [2Fe-2S]-[ferredoxin] = an acyl-CoA + CO2 + H(+) + 2 reduced [2Fe-2S]-[ferredoxin]
OENA8210
-
-
a 2-oxocarboxylate
CHEBI:35179
8.5
80.0
Escherichia coli C43 (DE3) cells
experimental evidence
Q96Y68
  OENC42007
2-oxoacid oxidoreductase (ferredoxin)
-
Sulfurisphaera tokodaii str. 7
111955
1.2.7.11
OENC42007.n.1
OENC42007.p
a 2-oxocarboxylate + CoA + 2 oxidized [2Fe-2S]-[ferredoxin] = an acyl-CoA + CO2 + H(+) + 2 reduced [2Fe-2S]-[ferredoxin]
OENA8210
-
-
a 2-oxocarboxylate
CHEBI:35179
8.5
80.0
Escherichia coli C43 (DE3) cells
experimental evidence
Q96XT4
  OENC42060
peptide-O-fucosyltransferase
-
Caenorhabditis elegans
6239
2.4.1.221
-
OENC42060.p
Transfers an alpha-L-fucosyl residue from GDP-beta-L-fucose to the serine hydroxy group of a protein acceptor
OENA18101
-
-
-
-
7.5
25.0
Pichia pastoris
experimental evidence
Q18014
  OENC42081
peptide-O-fucosyltransferase
-
Caenorhabditis elegans
6239
2.4.1.221
OENC42081.n.1
OENC42081.p
Transfers an alpha-L-fucosyl residue from GDP-beta-L-fucose to the serine hydroxy group of a protein acceptor
OENA18101
-
-
-
-
-
-
Pichia pastoris
experimental evidence
Q8WR51
  OENC42112
protein O-GlcNAcase
-
Bacteroides thetaiotaomicron VPI-5482
818
3.2.1.169
-
OENC42112.p
3-O-(N-acetyl-beta-D-glucosaminyl)-L-seryl-[protein] + H2O = L-seryl-[protein] + N-acetyl-D-glucosamine
OENA1901
-
-
3-O-(N-acetyl-beta-D-glucosaminyl)-L-seryl-[protein]
GENERIC:12251
6.0
37.0
Escherichia coli
experimental evidence
Q89ZI2
  OENC42113
protein O-GlcNAcase
-
Clostridium perfringens ATCC 13124
1502
3.2.1.169
OENC42113.n.1
OENC42113.p
3-O-(N-acetyl-beta-D-glucosaminyl)-L-seryl-[protein] + H2O = L-seryl-[protein] + N-acetyl-D-glucosamine
OENA1901
-
-
3-O-(N-acetyl-beta-D-glucosaminyl)-L-seryl-[protein]
GENERIC:12251
-
-
Escherichia coli
experimental evidence
Q0TR53
  OENC42182
DNA-formamidopyrimidine glycosylase
-
Homo sapiens
9606
4.2.99.18
OENC42182.n.1
OENC42182.p
The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OENA17272
-
-
-
-
7.4 - 7.5
-
Escherichia coli strain BL21(DE3)
experimental evidence
O15527
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